Halalkaliarchaeum desulfuricum: AArcSl_3245
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Entry
AArcSl_3245 CDS
T06283
Symbol
erf1
Name
(GenBank) peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
hdf
Halalkaliarchaeum desulfuricum
Pathway
hdf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hdf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
AArcSl_3245 (erf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hdf03019
]
AArcSl_3245 (erf1)
03012 Translation factors [BR:
hdf03012
]
AArcSl_3245 (erf1)
Messenger RNA biogenesis [BR:
hdf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
AArcSl_3245 (erf1)
Translation factors [BR:
hdf03012
]
Eukaryotic type
Release factors
AArcSl_3245 (erf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
ZnF_RZ-type
RbpA
Motif
Other DBs
NCBI-ProteinID:
AUX10851
UniProt:
A0A343TP29
LinkDB
All DBs
Position
3271749..3272999
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AA seq
416 aa
AA seq
DB search
MSTDVEEPGEDRRKYEFRKVIEELQEYEGSGTQLVTIYIPEDRQIADVVAHVTQEHSEAA
NIKSKQTRTNVQDALTSIKDRLRYYDTYPPDNGMVIFSGAVDSGGGRTEMVTRTLESPPE
PVQSFRYHCDSDFLTGPLEEMLMDKGLFGLIVLDRREANVGWLKGKRVEPVKSASSLVPG
KQRKGGQSAQRFARLRLEAIDNFYQEVAEMANELFVPERHDLDGILVGGPSPTKDEFLDG
DYLHHEIQDKVLGKFDVAYTDESGLHDLVDAADEALADQEVVKDKHQMEEFFENLNTGEE
ATYGFEQTRRNLIMGSVDRLLISEDLRSDVVVYECPNGHEEYEVVDSRHSTPDHECSECG
EPAEVQEREDVIEHLMAIAEQRGTETKFISTDFEKGEQLLDAFGGVAGILRYSTGI
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgacgtagaggagcccggcgaagaccggcggaagtacgagttccgcaaggtc
atcgaagagctccaggagtacgagggatcgggcacccagctcgtcaccatctacatcccc
gaagatcggcagatcgccgacgtcgtcgcccacgtcacccaggagcacagtgaggcggca
aacatcaaatccaagcagacccggacgaacgtccaggacgcgctcaccagcatcaaggac
cgcctgcgctactacgacacctatccgccggacaacgggatggtgattttctcgggcgcg
gtcgacagcggcggcggacgcacggagatggtgacccggacgctggagtcgcccccagag
ccggtccagtcgttccgctaccactgcgactccgacttcctgacgggaccgctcgaggag
atgctgatggacaaggggctgttcgggctgatcgtgctcgaccgccgggaggccaacgtc
ggctggctgaaaggcaagcgcgtcgagccggtcaagtccgcctcctcgctggtccccgga
aagcagcgcaagggtggccagtccgcccagcggttcgcccgcctgcgcctggaggcgatc
gacaacttctatcaggaggtcgccgagatggccaacgagctgttcgttccggagcgtcac
gacctcgacgggatcctcgtcggcggtccctcccccacgaaagacgagttcctcgacggc
gactacctccaccacgagatccaggacaaggtgctcgggaagttcgacgtcgcctacacc
gacgagtccggcctccacgacctcgtcgacgccgccgacgaggcgcttgccgatcaggag
gtcgtcaaggacaaacaccagatggaggagttcttcgagaacctcaacaccggcgaggag
gcgacctacgggttcgagcagacccgccggaacctgataatgggatcggtcgaccggctg
ttgatctccgaggacctccgatcggacgtcgtcgtctacgagtgtccgaacggccacgag
gagtacgaggtggtcgacagccgccactcgacgcccgaccacgagtgcagcgagtgtggt
gaacccgccgaggtccaggagcgcgaggacgtcatcgagcacctgatggcgatcgccgaa
cagcgcggcaccgaaaccaagttcatctccaccgatttcgaaaagggcgaacagttgctg
gacgccttcggcggcgtcgccggaatcttgcggtactcgacggggatctga
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