Halalkaliarchaeum desulfuricum: AArcSl_3277
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Entry
AArcSl_3277 CDS
T06283
Symbol
pcnA
Name
(GenBank) DNA polymerase sliding clamp
KO
K04802
proliferating cell nuclear antigen
Organism
hdf
Halalkaliarchaeum desulfuricum
Pathway
hdf03030
DNA replication
hdf03410
Base excision repair
hdf03420
Nucleotide excision repair
hdf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hdf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AArcSl_3277 (pcnA)
03410 Base excision repair
AArcSl_3277 (pcnA)
03420 Nucleotide excision repair
AArcSl_3277 (pcnA)
03430 Mismatch repair
AArcSl_3277 (pcnA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hdf03032
]
AArcSl_3277 (pcnA)
03400 DNA repair and recombination proteins [BR:
hdf03400
]
AArcSl_3277 (pcnA)
DNA replication proteins [BR:
hdf03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
AArcSl_3277 (pcnA)
DNA repair and recombination proteins [BR:
hdf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
AArcSl_3277 (pcnA)
MMR (mismatch excision repair)
Other MMR factors
AArcSl_3277 (pcnA)
TLS (translesion DNA synthesis) factors
Other TLS factors
AArcSl_3277 (pcnA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_N
PCNA_C
Motif
Other DBs
NCBI-ProteinID:
AUX10882
UniProt:
A0A343TP60
LinkDB
All DBs
Position
complement(3303606..3304481)
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AA seq
291 aa
AA seq
DB search
MNTAKTRLNSPFNLVRIRVGFGVDPFETGRKRVVFNARCRITSHMFKAIVSASTLRDALD
SVSVLVDECKIRLNEDELSIRAVDPANVGMVDLSLEAAAFESYEADGGVIGVNLNRLEDI
AGMADSDDLIQLELDEETRKLHIQMDGLSYTLALIDPDAIRQEPDIPDLDLPAEIVLEGA
QLDRGIKASDMVSDHIRLRVEENTEAFYIEAEGDTDDVDFELTTEDLIDLTVGPADSLFS
LDYLKDMNKAIPGDAEVVVELGEEFPVKLHYEFSEGLGQVTYMLAPRIQSD
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
gtgaatacggccaaaacgcggctgaactccccgttcaacctggttcggattcgagtcgga
ttcggtgtggatccgttcgaaacgggcaggaaacgggtggtttttaatgcgaggtgccgt
atcacttcccatatgttcaaggccatcgtgagcgcgtccacgctccgggacgcgctcgac
tcggtgagcgtgctggtcgacgagtgcaagatccggttgaacgaggacgaactctccatt
cgggcggtcgatcctgccaacgtcggtatggtcgatctctccctcgaagccgccgcattc
gagtcttacgaagcggacgggggcgtcatcggcgtcaacctcaaccgtctcgaggacatc
gcaggcatggccgacagcgacgatctaattcagctcgaactcgacgaggagacccggaag
ctccacatccagatggacgggctctcctacaccctcgcgctcatcgatccggacgcgatc
cgacaggagccggacattcccgacctggatcttcccgcggagatcgttctcgagggagca
cagctcgaccggggtatcaaggcctccgacatggtcagcgaccacattcggctgcgtgtc
gaggaaaacaccgaggcgttctacatcgaagcggagggcgataccgacgacgtcgacttc
gaactcaccaccgaggacctcatcgatctcaccgtcggccccgcggactcgctgttctcg
ctcgattatctcaaggacatgaacaaggcgatcccgggcgatgcggaagtcgtcgtcgaa
ctcggcgaggagttcccggtcaaactccactacgagttctccgaggggctcggtcaggtt
acctacatgctcgctccccggatccagagcgactga
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