KEGG   Halalkaliarchaeum desulfuricum: AArcSl_3277
Entry
AArcSl_3277       CDS       T06283                                 
Symbol
pcnA
Name
(GenBank) DNA polymerase sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
hdf  Halalkaliarchaeum desulfuricum
Pathway
hdf03030  DNA replication
hdf03410  Base excision repair
hdf03420  Nucleotide excision repair
hdf03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hdf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AArcSl_3277 (pcnA)
   03410 Base excision repair
    AArcSl_3277 (pcnA)
   03420 Nucleotide excision repair
    AArcSl_3277 (pcnA)
   03430 Mismatch repair
    AArcSl_3277 (pcnA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hdf03032]
    AArcSl_3277 (pcnA)
   03400 DNA repair and recombination proteins [BR:hdf03400]
    AArcSl_3277 (pcnA)
DNA replication proteins [BR:hdf03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    AArcSl_3277 (pcnA)
DNA repair and recombination proteins [BR:hdf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     AArcSl_3277 (pcnA)
   MMR (mismatch excision repair)
    Other MMR factors
     AArcSl_3277 (pcnA)
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    AArcSl_3277 (pcnA)
SSDB
Motif
Pfam: PCNA_N PCNA_C
Other DBs
NCBI-ProteinID: AUX10882
UniProt: A0A343TP60
LinkDB
Position
complement(3303606..3304481)
AA seq 291 aa
MNTAKTRLNSPFNLVRIRVGFGVDPFETGRKRVVFNARCRITSHMFKAIVSASTLRDALD
SVSVLVDECKIRLNEDELSIRAVDPANVGMVDLSLEAAAFESYEADGGVIGVNLNRLEDI
AGMADSDDLIQLELDEETRKLHIQMDGLSYTLALIDPDAIRQEPDIPDLDLPAEIVLEGA
QLDRGIKASDMVSDHIRLRVEENTEAFYIEAEGDTDDVDFELTTEDLIDLTVGPADSLFS
LDYLKDMNKAIPGDAEVVVELGEEFPVKLHYEFSEGLGQVTYMLAPRIQSD
NT seq 876 nt   +upstreamnt  +downstreamnt
gtgaatacggccaaaacgcggctgaactccccgttcaacctggttcggattcgagtcgga
ttcggtgtggatccgttcgaaacgggcaggaaacgggtggtttttaatgcgaggtgccgt
atcacttcccatatgttcaaggccatcgtgagcgcgtccacgctccgggacgcgctcgac
tcggtgagcgtgctggtcgacgagtgcaagatccggttgaacgaggacgaactctccatt
cgggcggtcgatcctgccaacgtcggtatggtcgatctctccctcgaagccgccgcattc
gagtcttacgaagcggacgggggcgtcatcggcgtcaacctcaaccgtctcgaggacatc
gcaggcatggccgacagcgacgatctaattcagctcgaactcgacgaggagacccggaag
ctccacatccagatggacgggctctcctacaccctcgcgctcatcgatccggacgcgatc
cgacaggagccggacattcccgacctggatcttcccgcggagatcgttctcgagggagca
cagctcgaccggggtatcaaggcctccgacatggtcagcgaccacattcggctgcgtgtc
gaggaaaacaccgaggcgttctacatcgaagcggagggcgataccgacgacgtcgacttc
gaactcaccaccgaggacctcatcgatctcaccgtcggccccgcggactcgctgttctcg
ctcgattatctcaaggacatgaacaaggcgatcccgggcgatgcggaagtcgtcgtcgaa
ctcggcgaggagttcccggtcaaactccactacgagttctccgaggggctcggtcaggtt
acctacatgctcgctccccggatccagagcgactga

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