Pikeienuella piscinae: G5B40_02175
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Entry
G5B40_02175 CDS
T06458
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hdh
Pikeienuella piscinae
Brite
KEGG Orthology (KO) [BR:
hdh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hdh03032
]
G5B40_02175 (topA)
03400 DNA repair and recombination proteins [BR:
hdh03400
]
G5B40_02175 (topA)
Enzymes [BR:
hdh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
G5B40_02175 (topA)
DNA replication proteins [BR:
hdh03032
]
Prokaryotic type
DNA Topoisomerases
G5B40_02175 (topA)
DNA repair and recombination proteins [BR:
hdh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
G5B40_02175 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QIE54351
UniProt:
A0A7L5BTI3
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All DBs
Position
470257..472839
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AA seq
860 aa
AA seq
DB search
MPVVVVESPAKAKTINKYLGPDYNVLASYGHIRDLPSKDGSVDPDNGFEMIWQVDSKAAP
HVRAIADALKADPKLILATDPDREGEAISWHLLEALKKRRALKGDAPVQRVVFNAITKSA
VTDAMRQPRGIDMELVEAYLARRALDYLVGFRLSPVLWRKLPGAKSAGRVQSVALRLIVE
REMEIEAFRAREYWTVKVELETPRGDPFEARLTELDGKKLDRFDLGDETAAKAAVAAIKA
RALKIASVEAKPASRNPSPPFMTSTLQQEASRKIGLGAQATMRAAQRLYEAGHITYMRTD
GIDMAPEAVKAAREAIAARYGESYVPKNPRVYKNKAKNAQEAHECIRPTVMTAAPDNLKG
LEPDQARLYELIWKRTLASQMESARLERTVVEVAGADGGVGLRATGQVVKFDGFLRVYEE
GRDDVVDEEEGLLPEILAGEGADQKAVIPLQHFTQPPPQYTEATLVKRMEELGIGRPSTY
ASIITVIQDREYVRKEKGRLIPEDKGRLVIAFLENYFKRIVNYDFTASLEADLDDVSGGR
AEWKAVLERFWKNFSADLEATSELRITDVLETINDVLAPHIFPDPGDGSDPRLCKACGMG
RLSLKTARSGGAFIGCSNYPDCRYTRSLGGEEAAEDRVLGQDEYGVDVWLKSGRFGPYVQ
LGEQDPGSKEKPKRASLPKGAAPQEMTLARALELLSLPRLVGKHPEDGEPIEAAIGRFGP
YVRHGKTYANLKDPDDVFTIGMNRAVELIAVKRANPGRGRTAATPLRELGEHPSGGKINL
MEGRYGPYVKWEKVNATLPKEADPATLSLEAALELIAAKAGKTPKKRAAPKKAAKKPAKK
KPAKKPAKKRAAGDAEGVVE
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtcgtcgttgtcgagtcgcccgccaaagccaagaccatcaacaaatatctcggg
cccgactacaatgtcctcgcgtcctatgggcatatccgcgatctgccgtcgaaggacggg
tcggtcgatcccgataacggattcgagatgatctggcaggtcgacagtaaggcggcgccg
catgtgcgcgccatcgcggatgcgctgaaagccgacccgaaactcattctcgccaccgac
cctgaccgggagggcgaggcgatctcgtggcatctgctggaagcgctgaagaagcgccgg
gcgctgaagggcgacgcgccggtgcagcgggtggttttcaacgcgatcaccaaatcggcg
gtgaccgacgcgatgcgtcagccgcgcggtatcgatatggagctggtcgaagcctatctc
gcccgccgcgcactcgattatctcgtcggcttccggctttcgccggtgctatggcgcaag
ctcccaggcgccaagtccgccggccgggtccagtcggtcgcgcttcgactgattgtcgaa
cgcgaaatggagatcgaggcgttccgcgcccgcgagtactggaccgtgaaggttgagttg
gagaccccgcgtggcgacccgttcgaggcgcggctgaccgagctagacggaaagaagctg
gatcggttcgatctcggggacgagacggcggcgaaggccgcggtggcggcgatcaaggcg
cgggcgttgaagatcgccagcgtcgaggcgaaaccggcgagccgtaatccctcgccgccc
ttcatgacctcgacgctgcagcaggaggcctcgcgcaagatcggccttggcgcgcaggcg
acgatgcgcgcggcccagcggctctatgaggccgggcatatcacctatatgcgaaccgat
ggcatcgacatggcgcctgaagcggtcaaggctgcgcgcgaggcgatcgcggcgcgttac
ggcgagtcctacgttcccaaaaacccgcgcgtctacaagaacaaggcgaagaacgcgcag
gaagcgcatgagtgcatccgtcccacggtgatgaccgcggcgccggataacctgaaaggg
ctggagccggatcaggctcggctctacgaattgatctggaagcgcaccctcgcgagccag
atggagtcggcgcggctcgagcgcacggtggtcgaggtcgccggggcggatggcggtgtc
ggactgcgcgcgacggggcaggtggtcaagttcgacggttttctccgtgtttatgaagaa
ggccgcgacgatgtagtggacgaggaggaggggctgttgcctgagatcctcgccggcgag
ggcgcggaccagaaggctgtgatcccgctccagcatttcactcaaccgccgccgcagtat
accgaggcgacgctggtcaagcgaatggaggagcttggcattgggcgcccctcgacctac
gcctcgatcatcacggtgatccaggaccgcgaatatgtgcggaaggaaaagggccggttg
atccccgaagacaagggacggctcgtcatcgcgttccttgaaaactatttcaagcgcatc
gtgaattacgacttcaccgcctcgctggaagcggacctagacgatgtttccggcgggcgg
gccgagtggaaagcggttctggagcggttctggaagaatttctccgctgatctggaggcg
acatcggaactcaggatcaccgatgtcctggagacgatcaacgatgtgctcgctccgcat
atcttccctgatccgggcgacgggagcgatccgcgcctctgcaaggcctgcggcatgggg
cgactttcgctgaagaccgcgcgctccggcggcgcgtttatcggctgctcgaactatcct
gactgccgctacacccgttcgctcggcggcgaggaggcggccgaggatcgtgtgctggga
caggacgaatacggcgtcgacgtctggctgaaatccgggcgtttcggcccctatgtccag
cttggcgaacaggacccagggtcgaaggaaaagccgaaacgcgcgtcgctgccaaaggga
gcggcgccgcaggagatgacgctggcgcgggcgctcgaacttctctcgctgccgcgtctc
gttggtaagcatcccgaggatggcgagccgatcgaggcggcgatcggccggttcggaccc
tatgtccgtcacggcaagacctatgcgaacttgaaggatccggatgatgtattcaccatc
ggcatgaaccgggcggtggagttgatcgcggtgaaacgcgccaatccaggtcgtgggcgg
acggctgcgactccgcttcgtgaactcggcgaacatccctcgggcggcaagatcaacctg
atggagggccgctacgggccgtacgtgaaatgggagaaggttaacgctacactcccgaaa
gaggcggacccggcgacgctgtcgctggaggccgcgttggagctgatcgctgctaaggcc
ggaaagacgccgaagaagagggccgcgccgaagaaagctgcaaaaaagcccgcaaagaag
aagccagcgaagaaaccggcgaaaaaaagggccgccggtgatgccgaaggggtggtggag
tag
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