KEGG   Pikeienuella piscinae: G5B40_02210
Entry
G5B40_02210       CDS       T06458                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
hdh  Pikeienuella piscinae
Pathway
hdh02020  Two-component system
hdh02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:hdh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    G5B40_02210 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    G5B40_02210 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hdh03021]
    G5B40_02210 (rpoN)
Transcription machinery [BR:hdh03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     G5B40_02210 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR
Other DBs
NCBI-ProteinID: QIE54358
UniProt: A0A7L5BUI2
LinkDB
Position
complement(475774..477264)
AA seq 496 aa
MQIGPRVELKQSQQLVMTPQLQQAIRLLQMSRLDTVDYLAQEVEKNPVLAIDDGGEMASS
ADTAREEAIDRAIARQDIGEAENGFETGRENLYEAAESYSVGGPSGAMSGGGTGRDGALA
DAGAQADFEETAAQKISLRDHLLPQIGASAAPRGTRALAALLVDELDEAGYLRVDIEALG
ARLGAHSGLAAEAVALLQSCEPTGIGARDLKECLTLQLKERDRFDPAMATLIDRLDDLAA
ARLAPLRAACGVDEEDLREMIAEIRRLEPRPGAAFTTGVAASVVPEVLIRRNTLGGWTVE
VNPDAMPKVLLDTAYVNELGASGSVEVKAYLTTCRQNADWLIRALEQRAQTILKVATEIV
RRQSGFFEQGVAALSPMTLKLVADEIGMHESTVSRVTANKFLACERGVFELKFFFTQGIA
SVDGGGAVSAAAVRHQIKSLIEKEDPSRSLSDDRIVTLLKQSGVDVARRTVAKYRETMNI
PSSAQRKRMKAAALGR
NT seq 1491 nt   +upstreamnt  +downstreamnt
atgcagatcgggccgcgcgttgaactgaaacaaagtcagcagctggtgatgacgccccag
ctacagcaggcgatccgactcttgcagatgtcccgtctcgacacagtcgattatctcgcc
caggaggtcgagaaaaacccggttctcgcgatcgacgatggcggagagatggcctccagc
gccgacacggcgcgggaggaggcgatcgaccgcgccatcgcccgccaggatatcggggag
gcggagaacggctttgagacagggcgcgaaaacctgtacgaggcggcggagtcgtattcc
gtcggcgggccgtcgggcgcgatgtccggcggcgggactggccgcgacggagcgctggcg
gacgccggcgctcaggcggatttcgaggagaccgcggcccagaaaatctctctgcgcgac
catcttctgccgcagatcggcgcgagcgccgcgccgcgcgggacacgggcgctcgccgca
ttgctggtcgatgaactagacgaagccggctatctccgcgtcgatatcgaggcgctcggc
gcccggctcggcgcgcattccggactcgccgcggaggcggtcgcgctgcttcagagttgt
gagccgaccggaattggcgcgcgcgacctgaaggaatgcctgacgctgcaactgaaggaa
cgcgaccggttcgacccagcgatggcgacgttgatcgatcgcctcgatgatctcgcggcg
gcgcggctggcgccgctccgcgcggcttgcggggtggatgaggaggatctgcgcgagatg
atcgcggagatccgccggctcgagccgcggccgggcgccgccttcacgaccggcgtcgcc
gcgtctgtggttcccgaggttctgatccggcgcaacacgctcggcggctggaccgtcgag
gtcaatccggatgcgatgcctaaggtcctgctcgacaccgcctatgtcaacgaactcggc
gcatccggctcggtcgaggtgaaagcctatctgacaacatgccggcagaacgcggattgg
ctgatccgggcgctcgaacagcgcgcgcaaaccatactgaaagtggcgacggagatcgtc
cgccgacagtccggattcttcgaacagggcgtcgcggcgctttcaccgatgacgttgaag
ctggttgcggatgaaatcggcatgcacgaatcaaccgtaagtcgagtcaccgccaataag
ttcctagcttgcgaacgcggagtctttgaactgaaattctttttcactcaagggattgcc
agcgtggacggcggcggcgcggtctccgccgcggcagttcgacaccagatcaagtctctg
attgaaaaggaggatccatcaagatctctctcggacgaccggattgtcactctactgaaa
caaagcggcgtcgatgttgcgcgccggacggtcgcgaaataccgtgagacaatgaatatc
ccgtcatcggcgcagcgaaaacggatgaaggcggcagccttgggacgttga

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