Pikeienuella piscinae: G5B40_03355
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Entry
G5B40_03355 CDS
T06458
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hdh
Pikeienuella piscinae
Pathway
hdh03030
DNA replication
hdh03430
Mismatch repair
hdh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hdh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G5B40_03355 (dnaE)
03430 Mismatch repair
G5B40_03355 (dnaE)
03440 Homologous recombination
G5B40_03355 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hdh03032
]
G5B40_03355 (dnaE)
03400 DNA repair and recombination proteins [BR:
hdh03400
]
G5B40_03355 (dnaE)
Enzymes [BR:
hdh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G5B40_03355 (dnaE)
DNA replication proteins [BR:
hdh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G5B40_03355 (dnaE)
DNA repair and recombination proteins [BR:
hdh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G5B40_03355 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
QIE54556
UniProt:
A0A7L5BWE3
LinkDB
All DBs
Position
complement(706905..710336)
Genome browser
AA seq
1143 aa
AA seq
DB search
MTDSPFIHLRLHSIYSLLEGAIPVKALPKLCAGLDMPAVAVTDTNNLFGALEFSETAAKA
GVQPIIGCQLDLAFAPPPERGQRAVPPAPVVALAQSEIGYRNLMALSSSAYLDAGDAPHH
VTPDGLIERSEGLILLTGAASGPLGRLVRQGREPEAAALLDRLAEGFGDRLYVELQRHGV
DGALRSAEEEATERWFVEEAYRRVLPLVATNDVYFPDADMYVAHDAFLCIGQGAYVNQED
RRRLTPEHRFKSGDEMRQLFDDLPEAIEMTAEIARRCHWRPKPHAPILPRFADDEVEELR
RQAKEGLAARLAVIPLAAPAESYAERLEYELGVIEGMGFPGYFLIVADFIKWAKEQNIPV
GPGRGSGAGSLVAYALTITDLDPLRYGLLFERFLNPDRVSMPDFDIDFCMDRREEVIHYV
QRKYGRDRVAQIITFGGMLSKAAVRDVGRVLQMPYGQVDRLSKLIPMEGVKPMSVKKARA
EEPRLEEAAREEFVVGQLLDIAEKVEGLLRNASTHAAGVVIGDRPLVELAPLYQDPRSDM
PATQFNMKWVETAGLVKFDFLGLKTLTVIQGALDLLRARGVEIDIGAIPLDDEKTYALYG
SAHSVAVFQVESQGMRDALRQLQPTSIEDIVALVALYRPGPMENIPKFCNVKNGREKRAS
IHPLIDSILDETQGIIVYQEQVMEIARKMAGYTLGGADLLRRAMGKKIQEAMDAERPKFL
EGAAKNGVDKAKAQEVWDLLDKFANYGFNKSHAAAYAVVSYQTAWLKANHPVEFMAAVMN
CDMHLTDKLAIYKREVDRLGIETAPPDVNLSEARFTVKDGRVLYALGALKNVGAEAMKLI
VAARAEGGAFRDLFDFARRVDCKRIGKRPMEMLARAGAFDALEPNRRRVFESIDVLMAYS
AASIEAAASAQVSLFGEAGEGLPPPRLPAPEDWLPTERLAEEFAAVGFYLSGHPLDDYAG
PLKRKRVHTYAEIVAGGRTGVATRVAGSVMVKQERKSAKGSRYAFVRLSDPTGVYEVMVF
ADLLAAHRDDLEPGRNIVLSVTPEIDGDQVKMLANSVQPIDGAVRDAAPAGLRIHVTEPR
ALESIRARLADAGQGRGGPVNIVVTLPESGQEVDIILPGEFPVTPAIRGAIKAATGVLHV
EEF
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgaccgactcgcccttcatccatctccggctccattcgatctattcgcttctcgaaggg
gcgatcccggtgaaagcgctgccgaagctgtgcgccggcctcgatatgccggcggtggcg
gtcaccgacacgaacaacctgttcggggcgctggagttttcggaaacggctgcgaaggct
ggcgtgcagccgatcatcggctgccagctcgacctcgcgtttgcgccgccgcccgaacga
gggcagcgcgccgtcccgcccgcgccggtggtcgcgctggcgcagtctgagatcggctac
cgcaatcttatggcgctgtcgtcctcggcctatctcgacgcgggggatgcgccgcatcat
gtcacgcccgatgggctgatcgagcggagcgaggggctgatcctgctgaccggcgccgcg
tcgggcccgctcgggaggctggtgcggcaggggcgcgagcccgaagcggcggcgcttctg
gatcggttggcggaggggttcggcgacaggttatatgtcgagctgcaacgtcatggcgtc
gatggcgcgcttcgttctgcggaggaggaggcgaccgaacgctggttcgtcgaggaagcc
tatcgccgcgtcctgccgctggtcgcgacaaacgacgtctattttcccgacgcggatatg
tatgttgcgcatgacgcgttcctctgcatcggtcagggcgcctatgtgaatcaggaggat
cggcgccgcctgacccccgagcaccggttcaagtccggtgatgagatgcgccagctcttt
gacgatcttcctgaagccatcgaaatgacggcggagatcgcccggcgttgccattggcgc
ccgaagccccacgcgccgattctgccgcgtttcgccgatgacgaagtggaggaattgcgc
cggcaggccaaggaggggctggcggcgcgtcttgcggtcatcccgctcgcggctccggcc
gagagctacgccgagcgcctcgaatacgagcttggcgttatcgagggcatggggtttccg
ggctatttcctgatcgtcgccgatttcatcaaatgggcgaaggagcagaatattcccgtc
gggcccggtcgcggctctggcgcggggtcgctcgtcgcctatgcgctcaccataacggac
ttggatccattgcgttacgggcttttgtttgagcgatttctgaatccagatcgcgtctcc
atgcccgacttcgatatcgatttctgcatggatcggcgcgaggaggtgatccactacgtc
cagcggaaatatggtcgcgaccgggtggcgcagatcatcaccttcggcgggatgctctcc
aaggcggcggtccgcgatgtcggccgtgtacttcagatgccctacgggcaggtcgacagg
ctctccaagctgattccgatggagggcgtgaagccgatgtcggtgaagaaggcaagggcg
gaggagccgcggctggaggaggccgcgagggaggaattcgtcgtcggccagcttctggat
atcgccgagaaggtcgaagggctcctgcgcaacgcctccactcatgccgccggcgtggtg
atcggcgaccgaccgctggtggagctggcgccgctttatcaagatccgcgctccgacatg
cctgcgacccagttcaacatgaaatgggtggagaccgcagggctggtgaagttcgacttt
ctcggcctgaagacgttgacggtgatccagggcgcgctcgatctgctgagggcgcgtggc
gtggagatcgatatcggcgcgatcccgctcgacgatgaaaagacatacgcgctttatggt
tcggcccattcggtcgcggtgttccaggtggaaagccaggggatgcgcgacgcgctgaga
caattgcagccgacatccatcgaagacatcgtcgcgctggtcgcgctctatcgccccggg
ccgatggagaacattccgaaattctgcaacgtgaagaacgggcgcgagaaacgagcctct
atccatccgctgatcgacagcatcctggatgagacgcagggcatcatcgtctatcaggaa
caggtgatggagatcgcccgcaagatggcgggctacacgcttggcggcgcggatctcttg
cgccgcgccatgggcaagaagattcaggaggcgatggacgccgagcgtccgaagttcctc
gaaggcgcggcgaagaacggcgtcgacaaggcgaaggcgcaggaggtttgggaccttctc
gacaagttcgccaactatggcttcaacaagagccacgccgccgcctacgccgtggtcagc
taccagaccgcctggctgaaggctaaccacccggtggagtttatggccgcggtgatgaat
tgcgacatgcatctcaccgacaagctggcgatctacaagcgtgaggtcgatcgcctgggg
atcgagacggcgccgccggacgtaaacctttccgaagcccgcttcacggtgaaagatgga
cgcgtgctctatgcgctcggcgcgctgaagaacgtcggcgccgaggcgatgaagctgatc
gtggcggcgcgcgccgagggcggcgcattccgggatctcttcgatttcgcgcgcagggtg
gactgcaagcggatcggcaagcggccgatggagatgttggcgcgcgccggcgcgttcgac
gcgctggagccgaatcgccggcgggtgttcgagtccatcgacgtgctgatggcctactcc
gccgcctcgatcgaggcagcggcgtcggcgcaggtctcgctcttcggcgaggcgggggag
ggcctgccgccgccgcgcctgccggcgcccgaggactggctgccgacggagcggctggcg
gaggagttcgcggctgtcgggttctatctctccggccatccgctcgacgattacgccggg
ccgctgaagcgcaaacgcgttcacacctacgccgagatcgtcgcgggcgggcgcaccggc
gtcgccacccgggtcgccggctcggtgatggtgaagcaggagcgcaaatcggcgaaaggc
tcacgctacgcatttgtccggctttcggacccgacaggggtctacgaggtgatggtcttc
gcggacctcctcgcggcgcatcgcgacgatctggagccggggcgaaacatcgtcctttcg
gtgacgccggagatcgacggcgatcaggtgaagatgctggccaattcggtgcagccgatc
gacggcgcggtgcgggacgcggcgccggcggggttgcgtatccatgtgaccgaaccacgc
gcgctggaaagtatccgcgcgcggctggcggatgcggggcaagggcgtggcgggccggtc
aacatcgtcgtcacgctgccggaatcggggcaggaagtggacatcatcctgcccggcgaa
ttccccgtgacgccagcgatccgtggcgcgatcaaggcggcgacgggcgttctgcatgtc
gaggagttctga
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integrated database retrieval system
