Pikeienuella piscinae: G5B40_13840
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Entry
G5B40_13840 CDS
T06458
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
hdh
Pikeienuella piscinae
Brite
KEGG Orthology (KO) [BR:
hdh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hdh03016
]
G5B40_13840 (thpR)
Enzymes [BR:
hdh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
G5B40_13840 (thpR)
Transfer RNA biogenesis [BR:
hdh03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
G5B40_13840 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
QIE56447
UniProt:
A0A7L5C0Y8
LinkDB
All DBs
Position
2922060..2922614
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AA seq
184 aa
AA seq
DB search
MRLFAAIAPPDKLRDRLVALQAGLPSGRLTAWENLHLSLAFFGELDGARAEDLHAALGGV
RAPEFDLTFDGVGAFGGARPRLLYAGVGASPALFHLHDRVAQAARDAGVAMPAERYAPHV
TLKRLKPGEMPAGRVARWLAGGAGFFAGPVPVRDFRLYRSTLGRVAPVYDEVARYGLAAP
AGRR
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgcgccttttcgccgccatcgcgccgccggacaagctgcgcgaccggctcgtcgcgttg
caggcagggcttccctccggtcggctgacggcatgggagaatcttcacctctccctagcg
ttcttcggcgagttggacggcgcgcgggcggaagaccttcacgcggcgctcggtggcgtc
cgcgcgccggaattcgatctgacgttcgacggtgtcggggcgttcggcggcgcgcgtccg
cggcttctctacgccggggtcggcgcgtcgcccgcattgtttcatctgcatgacagggtc
gcccaggccgcgcgcgatgcgggcgtggctatgccggccgaacgctatgcgccgcatgtc
acgttgaagcggctgaaaccgggcgagatgccggcgggccgcgtcgcgcgctggctggct
ggcggggcggggttcttcgccgggccggttccggtgcgcgatttcaggctctatcgctct
actctgggccgggtcgcgccggtctacgatgaggtcgcgcgctatggcctggcggcgccg
gccgggcgcaggtga
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