Pikeienuella piscinae: G5B40_16060
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Entry
G5B40_16060 CDS
T06458
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hdh
Pikeienuella piscinae
Pathway
hdh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hdh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G5B40_16060 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hdh03019
]
G5B40_16060 (pnp)
03016 Transfer RNA biogenesis [BR:
hdh03016
]
G5B40_16060 (pnp)
Enzymes [BR:
hdh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
G5B40_16060 (pnp)
Messenger RNA biogenesis [BR:
hdh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
G5B40_16060 (pnp)
Transfer RNA biogenesis [BR:
hdh03016
]
Prokaryotic type
tRNA degradation factors
G5B40_16060 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
QIE56816
UniProt:
A0A7L5C2N8
LinkDB
All DBs
Position
3381500..3383617
Genome browser
AA seq
705 aa
AA seq
DB search
MFDITTKSIEWAGETLTLETGKIARQADGAVVATLGETSVLAAVVFEKKPKVGFDFFPLT
VHYQEKYYAAGKIPGGFFKREARPTEKETLTSRLIDRPIRPLFVPGFKHETQVICTVLSH
DLENDPDIVAMIAASAALTISGCPFRGPIGCVRVGFNANGEYLLNPKQDEVKESRLNMVL
AGTKAAVMMVESEAAELSEDEMLGAVTFGHNAMQPVIDMIIEMAEECAKEPFDFQPPDNS
ELYTKVKSLGETAMREAFAITDKQERQAAIAAARETIKGGLTEEEAEIAAKSLFKELEAE
VVRGDIVKTGKRIDGRDLVTVRPIVSEVGVLNRTHGSALFTRGETQALVVTTLGTGDDEQ
MIDALEGMYRSPFMLHYNFPPYSVGEAGRVMGPGRREIGHGKLAWRALQAVLPAPTDFPY
TIRIVSEITESNGSSSMASVCGASLSMMDAGVPLKAPVAGVAMGLILQDDGQYAVLTDIL
GDEDHLGDMDFKVAGTSAGVTSLQMDIKVAGITEEIMRTALAQAKDGRAHILGEMAKALS
AGRQEFSAHAPRIETMQINPDKIREVIGSGGKVIRSIVEESGAKVDINDEGIIKLASPDA
ACIEKARELINSIVAEPEEGRIYRGKVVKIMDFGAFVNFFGKRDGLVHVSQMSYERGSNP
KELVKEGQEVWVKLMGFDDRGKVRLSMKVVDQETGKEIKKEEAAG
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatatcaccaccaaatctatcgagtgggcaggcgaaacgctgacgctggaaacg
ggcaagatcgcccgtcaggctgacggcgccgtcgtcgccaccctcggcgagacttcggtt
ctcgccgccgttgttttcgagaagaagccgaaggtcggcttcgatttcttcccgctgacc
gttcactatcaggaaaaatactacgctgcgggcaagatccccggcggcttcttcaagcgt
gaggcgcgcccgacggagaaggagacgctgacctcccgtctgatcgaccggccgatccgc
ccgctcttcgttccgggtttcaagcatgagacgcaggtgatctgcaccgtgctcagccat
gatctggaaaacgatcccgacatcgtcgcgatgatcgccgcctccgctgcgctgacgatc
tccggctgcccgttccgcggtccgatcggctgcgttcgcgtcggcttcaacgccaatggc
gagtatctcctcaacccgaaacaggatgaggtgaaggaaagccggctcaacatggtcctc
gccggcaccaaggctgcggtgatgatggtcgaatccgaggcggccgagctttccgaggac
gagatgctgggcgccgtgaccttcggtcataacgccatgcagccggtgatcgacatgatc
atcgagatggccgaggaatgcgcgaaggagcctttcgacttccagcccccagacaattcc
gaactctacaccaaggtcaaatcgctcggcgagacggcgatgcgcgaagccttcgcgatc
accgacaagcaggagcgtcaggcggcgatcgccgccgcgcgcgaaacgatcaaaggcggc
ctgacggaagaggaggcggaaatcgccgccaagagcctcttcaaggagcttgaggccgag
gtcgtccgcggcgacatcgtcaagacaggcaagcggatcgacgggcgcgacctggtcacc
gtccgtccgatcgtttccgaggtcggcgttctcaaccggacccacggttcggcgctcttc
acccgtggtgagacgcaggcgctggtcgtcaccacgctcggcaccggcgatgatgagcag
atgatcgacgcgctcgagggcatgtatcgctcccccttcatgctgcattacaacttcccg
ccctattcggtcggcgaagcggggcgtgtgatgggcccgggccggcgcgagatcgggcac
ggcaagcttgcttggcgtgccctgcaggcggttctgccggcgccgacggatttcccctat
acgatccgcatcgtctcggagatcaccgaatcgaacggctcatcctcgatggcgagcgtc
tgcggcgcctcgctctcgatgatggatgcgggcgttccgctgaaggcgccggtcgcgggt
gtcgcgatgggtcttatcctgcaggatgacggccagtacgcggtgctgacggatattctt
ggcgacgaggatcaccttggcgacatggatttcaaggtcgcgggcacctcggccggcgtc
acctccttgcagatggacatcaaggtcgccggcatcaccgaggagatcatgcgcaccgct
ctcgcccaggcgaaggacggccgcgcgcatattctcggcgagatggcgaaggcgctctcc
gccggccggcaggagttttcggcccacgccccgcgtatcgagacgatgcagatcaacccg
gacaagatccgcgaagtgatcggctcgggcggcaaggtgatccgctccatcgtcgaggaa
tcgggcgcaaaggtcgacatcaacgacgaggggatcatcaagctcgcctcgcccgacgcc
gcctgcatcgagaaggcgcgcgagttgatcaattccatcgtcgccgagcccgaggaaggt
cgcatctacaggggcaaggtcgtcaagatcatggacttcggcgccttcgtgaacttcttc
ggcaagcgcgacgggctcgtccatgtcagccagatgtcctatgagcgtggctccaatccg
aaggagctggtgaaggaaggccaggaagtctgggtcaagctgatgggcttcgacgatcgc
ggcaaggtccggctttcgatgaaggtcgtcgaccaggagaccggcaaggagatcaagaag
gaagaggccgccggctga
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integrated database retrieval system
