Pikeienuella piscinae: G5B40_16235
Help
Entry
G5B40_16235 CDS
T06458
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hdh
Pikeienuella piscinae
Pathway
hdh03410
Base excision repair
hdh03430
Mismatch repair
hdh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hdh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G5B40_16235 (recJ)
03430 Mismatch repair
G5B40_16235 (recJ)
03440 Homologous recombination
G5B40_16235 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hdh03400
]
G5B40_16235 (recJ)
DNA repair and recombination proteins [BR:
hdh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
G5B40_16235 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
G5B40_16235 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
G5B40_16235 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Prok-RING_1
Motif
Other DBs
NCBI-ProteinID:
QIE56848
UniProt:
A0A7L5C148
LinkDB
All DBs
Position
complement(3417195..3418955)
Genome browser
AA seq
586 aa
AA seq
DB search
MATERAFLDVESSVLGRRWTGPGAEAERMGAAITRALGAPEIIGRVLALRGVTPEGAAAH
LDPTLKTLLPDPSTLRDMDRAAARLVDAVARRQRIAIFGDYDVDGGSSTALLVCWLRDLG
REATVYIPDRVDEGYGPNVEAMTALAGEHDLIVCVDCGTLSHEPVAAAVVAGADVMIADH
HLAGETLPECAAVVNPNRHDDESGMGHLCAAGVVFLLLVAANRLLRARGAAQPDLMAALD
LVALATIADVAPLIGVNRAFVRQGLKVMAGRARPGLRALADIAKLTAPPSAFHLGYLLGP
RVNAGGRIGKADLGARLLSTLSAEEASGIAHELDRLNAERRRIEAEVLEAATLHVEARGA
DGPLVWAAAPGWHPGVVGIVAARLKERFDRPAVVIGVADGVGKGSARSVEGVDLGAAVAA
LAREGALLKGGGHRMAAGLTVAADGIEAAMAALGAKLAKAVGARPAARALRIDGAVAPGA
ATPDLVEMLERAGPFGQAARAPRFAIPAVRVAFAKRAGESHLRLTLQDPAGGRLDAIAFR
AFEGPLGPFLDGTGGAPVHLAGRLEIDDWGGRRKAKLTVEDAAPAG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgaaagggcctttctcgatgtcgaaagctccgtcctcggccgacgctggacc
ggccccggcgctgaggcggagcgcatgggcgccgccatcacccgcgcgctcggggcgccg
gagatcatcggccgggtcctcgcgcttcgcggggtgacgccagaaggcgcggccgcgcat
ctcgacccgacgctgaagacgctgctgcccgacccgtccacgctccgcgacatggatcgc
gccgccgcgcgcctcgtcgatgcggttgcgcgccgccagcgcatcgcgatcttcggcgac
tacgatgtcgatggcgggtcgtccaccgcgctgctcgtctgttggctgcgcgatcttggg
cgcgaggcgacggtctacattcccgaccgggtcgacgagggttacgggccgaatgtcgag
gcgatgaccgcgctcgccggcgagcacgacctgatcgtctgcgtcgattgcggcacgctc
agccacgagcccgtcgccgccgcagtcgtggcgggggccgatgtgatgatcgccgatcac
cacctggcgggagagacgcttcccgaatgcgcggccgtggtgaatccgaaccggcatgac
gacgaaagcggcatgggccatctctgcgccgccggggtggtctttctcctgctggtcgcc
gccaaccggctgctgagggcgcgcggagccgcgcagccggatctgatggcggcgctcgat
ctcgtcgcgctcgccaccatcgccgatgtcgcgcctctgatcggggtgaaccgcgccttc
gtgcgacaggggctgaaggtgatggcggggcgcgcgcggccgggtctgcgcgccctcgcc
gacatcgccaagctgaccgcgccgccgagcgcctttcatctcggctatcttctcgggcct
cgagtcaacgcaggcgggcgcatcggcaaggccgatctcggcgcgcggcttctctccaca
ctttcggcggaagaggcgtcggggatcgcccatgaacttgatcgcctgaacgccgagcgc
aggcgaatcgaggccgaagtgcttgaggcggcgacccttcacgtcgaggcgcgcggcgcc
gacgggccgctcgtctgggccgccgcgcctggctggcatcccggcgtcgtcggcatcgtc
gccgcgcggctgaaggagcggttcgaccgcccggcggtggtgatcggcgtggcggatggc
gtgggcaagggttcggcccgctcggtggagggcgttgacctcggcgcggcggtcgcggcg
ctggcgcgcgaaggcgcgctgctgaagggcggcggacaccggatggcggccgggctgacg
gtggccgcggacgggatcgaggcggcgatggcggcgctcggcgcgaagctggcgaaagcg
gtcggcgcccgaccggccgcgcgcgcgcttcgtatcgacggcgccgtcgcgcccggcgcc
gcgacgcccgatctggtcgaaatgctggagcgcgccggcccgttcggccaggcggcgcgc
gcgccgcgcttcgccattccggctgtgcgcgtcgccttcgccaagcgcgccggcgaaagc
catctccgacttacgcttcaagacccggcgggcgggcggctcgacgccatcgcctttcgc
gccttcgaggggccgctcggccccttcctcgacggaaccggcggcgcgccggtccatctc
gccgggcggctggagatcgacgactggggcggaaggcgaaaggccaaactgacggtggag
gacgccgcgcccgccgggtga
DBGET
integrated database retrieval system
