Pikeienuella piscinae: G5B40_18900
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Entry
G5B40_18900 CDS
T06458
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
hdh
Pikeienuella piscinae
Brite
KEGG Orthology (KO) [BR:
hdh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hdh03032
]
G5B40_18900 (gyrB)
03400 DNA repair and recombination proteins [BR:
hdh03400
]
G5B40_18900 (gyrB)
Enzymes [BR:
hdh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
G5B40_18900 (gyrB)
DNA replication proteins [BR:
hdh03032
]
Prokaryotic type
DNA Topoisomerases
G5B40_18900 (gyrB)
DNA repair and recombination proteins [BR:
hdh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
G5B40_18900 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QIE57329
UniProt:
A0A7M3T5P8
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Position
3971593..3974043
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AA seq
816 aa
AA seq
DB search
MADKEQEPEVYGADSIKVLKGLEAVRKRPGMYIGDTDDGSGLHHMVYEVVDNGIDEALAG
HCDTVSVTLLADGSVAVSDNGRGIPTDIHAEEGVSAAEVIMTQLHAGGKFDSNSYKVSGG
LHGVGVSVVNALSKWLELRIWRHDKEHFVRFEGGFTTQPLRVVGPANGRKGTEVRFLASE
ETFTNLDYSYKTLEHRLRELAFLNSGVRITLRDERPAEPLEETMVYEGGVREFVKYLDRS
KSPLIPAPIYVNGERDGIGVEVAMWWNDSYHENVLPFTNNIPQRDGGAHVAGFRGALTRT
INSYATSALAKKEKVTLSGDDAREGLTCVLSVKVPDPKFSSQTKDKLVSSEVRPAVEGLM
NEKLAEWFEENPADARVIVGKIVEAALAREAARKARELTRRKTAMDVAFLAGKLKDCSEK
DAAKTELFLVEGDSAGGSATQGRDRGTQAVLPLRGKILNVERARFDRMLSSQEIGNLVMA
LGTGIGRDEFDISKLRYHKVVLMTDADVDGAHIRTLLLTFFYRQMPELIEGGYLYIAQPP
LYKVARGKSEVYLKDQKALEDYLIAQGLDGVALRLASGAQIAGEDLRRVLEEARAVRSAL
SAFPTHLPRFVLEQSAIGGVFRRRPREEAEAGWSGQLLRLPAGEAAALVAARLDAIAPET
EQGWVGRAAQDGGMIFERTVRGVTETRVIDAAACQSAEARRLAGFAESLHEIYDRPAALE
RKDRSSPVRAPTELLDLVLAEGEKGLSLQRYKGLGEMNPDQLWETTLDPNARTLLQVRID
HIDEANEIFTTLMGDVVEPRRKFIQDNALSVVNLDV
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaagaacaggaacctgaggtctatggggccgattccatcaaggttctcaag
gggctggaggctgtcaggaaacgtcctggcatgtatatcggcgacactgacgatggctcc
ggcctgcaccacatggtctatgaggtggtcgacaacggcatcgacgaggcgctggccgga
cactgcgacacggtttcggtgacgcttcttgccgacgggtcggtcgcggtgtcggataac
ggtcgcggcattccgaccgatatccacgccgaagagggggtttccgccgccgaagtgatc
atgacccagctccacgccgggggtaagttcgactccaattcctacaaggtttcgggcggg
ctgcatggcgttggcgtttcggtggtcaacgcgctctccaaatggctggaactgcgcatc
tggcgccacgacaaggagcatttcgtccgtttcgagggcggcttcacgacccagccgctt
cgggtcgtcggcccggcgaacggcaggaaggggaccgaggtgcgttttctcgcatcggaa
gagaccttcaccaatctcgattacagctacaagacgctggagcaccggttgcgcgaactc
gccttcctgaattccggcgtccgcatcacgctgcgcgacgagcggccggccgaaccgctc
gaggagacgatggtctatgagggcggcgtccgcgagttcgtgaaatacctggaccggtcc
aaatcgccgctgatccccgcgccgatctatgtgaacggcgagcgcgacgggatcggcgtc
gaggtcgcgatgtggtggaatgacagctaccacgagaatgtcctcccgttcaccaacaat
attccgcagcgcgacggcggcgcgcatgtggcgggctttcgcggcgcgctgacgcgaacg
atcaattcctacgccacctccgcgctcgccaagaaggagaaggtgacgctttcaggggac
gacgcgcgcgaagggctgacctgtgtgctgtccgtcaaggttccggatccgaaattctca
tcccagaccaaggacaagctggtctcctcggaagtgcgcccggctgtcgaggggctgatg
aacgagaagctcgccgaatggttcgaggagaacccggccgacgcgcgggtcatcgtcggc
aagatcgtcgaggcggccctggcgcgcgaggcggcgcgaaaggcgcgtgaactgacccgc
cgcaagaccgcgatggatgtcgcgttcctggccggaaagctgaaggattgctctgaaaag
gacgccgcgaagaccgagctgttccttgtcgagggcgacagcgcgggtggttcggcgacg
caagggcgcgaccgcggcacacaggcggtgctcccccttcgcggcaagatcctgaacgtg
gagcgggcgcggttcgaccggatgctctctagtcaggagatcggcaatctcgtcatggcg
ctcggcaccgggatcgggcgagacgagttcgacatatcgaaactgcgctatcacaaggtt
gtgctgatgaccgacgccgacgttgacggcgcgcatatccgcacgcttctgctcacgttc
ttctaccggcagatgccggagctgatcgagggcggatacctctatatcgcccagccgccg
ctctataaggtcgcgcgcggcaagtcggaggtctatctgaaggaccagaaggcgctggag
gattacctgatcgcgcaggggctcgacggcgtggcgctccgcctcgcttcgggcgcgcag
atcgccggcgaggatctgcggcgcgtgctggaggaagcgcgcgcggtcaggagcgcgctt
tccgcctttccgacgcatttgccgcgtttcgtgctggagcagtcggcgatcggtggcgtt
ttccgccgccgtccgcgcgaggaagccgaggccggctggtccggtcagcttctgcgcctg
ccggcgggcgaggcggcggcgctggtcgcggcccggctcgacgccatcgcgccggagacc
gagcagggctgggtcgggcgcgcggcccaagatggcggaatgatcttcgagcgcaccgtg
cgcggcgtcacggagacaagggtgatcgacgccgccgcctgccagtcggccgaagcgcgc
cgactggccgggttcgcggaaagcctgcatgagatctacgaccgcccggcggcgctggag
cgcaaggatcggtcctcaccggtccgcgcgccgaccgaactgctcgatctggtgctggcg
gagggcgagaaagggctcagcctgcagcgctacaaggggctgggcgaaatgaacccggac
cagctctgggagacgacgctggacccgaatgcgcgcacgcttctgcaggttcggatcgac
catatcgacgaagcgaacgagattttcaccaccctgatgggcgacgtggtcgaaccgcgg
cggaaattcattcaggacaacgcgttgagcgtggtgaatctcgacgtatag
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