Hartmannibacter diazotrophicus: HDIA_0004
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Entry
HDIA_0004 CDS
T05217
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
hdi
Hartmannibacter diazotrophicus
Brite
KEGG Orthology (KO) [BR:
hdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hdi03032
]
HDIA_0004 (gyrB)
03400 DNA repair and recombination proteins [BR:
hdi03400
]
HDIA_0004 (gyrB)
Enzymes [BR:
hdi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HDIA_0004 (gyrB)
DNA replication proteins [BR:
hdi03032
]
Prokaryotic type
DNA Topoisomerases
HDIA_0004 (gyrB)
DNA repair and recombination proteins [BR:
hdi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HDIA_0004 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
GyrB_insert
GyrB_hook
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
SON53545
UniProt:
A0A2C9D217
LinkDB
All DBs
Position
1:4460..6886
Genome browser
AA seq
808 aa
AA seq
DB search
MSEAVEAVTPEYGAESIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDEALA
GHATEVRVTLNAEGSVTVSDNGRGIPTDIHSGEGVSAAEVIMTQLHAGGKFDQNSYKVSG
GLHGVGVSVVNALSTWLDLRIWRAGNEHRMRFRHGDPEAPLKIVGPADGRKGTEVTFMPS
PETFTMIEFDYATLERRLRELAFLNSGVRIILSDLRGVEPRVDELHYEGGLEAFVRYLDR
SKKPLIAAPITTSTERDGVTVEAALWWNDSYHEHVLCFTNNIPQRDGGTHLAGFRGALTR
QVTSYAESSGIAKREKVSLTGDDCREGLTCVLSVKVPDPKFSSQTKDKLVSSEVRPVVEG
ALNEAFATWFEEHPAEAKVIVSKVCEAAAAREAARKARELTRRKGALDVASLPGKLADCQ
ERDPSKSEIFIVEGDSAGGSAKSGRNRANQAILPLRGKILNVERARFDKMLSSDMIGTLI
TALGTSIGPDEFNADKLRYHKIIIMTDADVDGAHIRTLLLTFFFRQMPELIERGHIYIAQ
PPLYKVTRGKSETYLKDERAFEDFLIDQGLEDASLTLASGEVRAGEDLRAIINRARQIRA
ILEGLHTRYDRGVVEQAAIAGALNAEILSDHEKALVAAAYVARRLDILAEEYERGWTGEA
REDGSLLFERTVRGVREATGVDHALLSSADARKLDGHSQHLQEIYGKAAMLRRREQEMPV
RGPSALLDAIFALGRKGITMQRYKGLGEMNAEQLWETTLDPSIRSLLQVKVSEAMEADDI
FMRLMGDEVEPRREFIQTNALSVANLDV
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagctgttgaagccgtcacgcccgaatatggcgcggagtcgatcaaggtgctc
aaggggctcgatgccgtgcgcaagcggccgggcatgtatatcggcgacaccgacgacgga
tccggcctgcaccacatggtctatgaggtcgtggacaacgccatcgacgaggcgctggcc
ggccacgccaccgaagtgcgcgtcacgctgaacgccgagggctccgttacggtgtccgac
aacggacgtggcattccgaccgacattcactcgggcgaaggcgtttcggcggccgaggtc
atcatgacccagctccacgccggcggtaagttcgaccagaattcctacaaggtctccggc
ggtctccatggcgtcggcgtctcggtcgtgaatgcgctgtccacctggctggacctgcgc
atctggcgggccggcaacgagcatcgcatgcgctttcgccatggcgatccggaagcgccg
ctgaagatcgtcggtccggcggacgggcgcaagggcacggaagtgaccttcatgccgagc
cccgagaccttcaccatgatcgagttcgactatgcgacgctggagcggcgcctgcgcgaa
ctcgccttcctgaattccggcgtcaggatcatcctgtccgatttgcgcggcgtcgagccg
agggtggatgaactgcactacgagggcggtctggaagccttcgtgcgctatctcgaccgc
tccaagaagccgctcatcgccgcgccgatcaccacctccaccgagcgcgacggcgtgacg
gtcgaggcggcgctgtggtggaacgacagctaccacgagcatgtgctctgcttcaccaac
aacattccccagcgcgacggcggcacccatctggccggctttcgcggggcgctgacccgg
caggtgacgtcctatgcggaatcgagcggcatcgccaagcgcgagaaggtctcgctcacc
ggcgacgactgccgcgaggggctgacctgcgtcctctccgtgaaggtgccggacccgaaa
ttctcgtcccagaccaaggacaagctcgtctcctccgaggtgcggcctgtggtcgagggc
gccctcaacgaagctttcgccacctggttcgaggagcatcccgccgaggccaaggtcatc
gtctccaaggtctgcgaggcggccgcagcccgcgaggcggcgcgcaaggcccgcgaactg
acccggcgcaagggcgcgctcgacgtcgcctccctgccgggcaagctcgccgactgtcag
gagcgtgacccgtcaaagtccgaaatcttcatcgtcgagggtgactcggccggcggatcg
gccaagagcgggcgcaaccgcgccaaccaggcgatcctgccgttgcgcggcaagatcctg
aatgtcgagcgtgcgcgcttcgacaagatgctctcctccgacatgatcggcacgctgatc
acggcgcttggcacctccatcggcccggacgagttcaacgccgacaagctgcgctaccac
aagatcatcatcatgacggacgccgacgtcgacggcgcccacatccgcaccctgctgctc
accttcttcttccgccagatgccggaactgatcgagcgcggccacatctacattgcccag
ccgccgctctacaaggtcacccggggcaagtcggagacctatctgaaggacgagcgtgcc
ttcgaggacttcctgatcgatcagggccttgaggatgccagcctgacgctcgccagcggc
gaggtccgtgccggcgaggacctgcgcgccatcatcaatcgggcgcggcagattcgtgcg
atcctggaagggcttcacacgcgctacgatcgcggtgtcgtcgagcaggccgcaatcgcc
ggggcgctcaacgccgaaattctctccgatcacgaaaaggcgctcgtcgcggcggcctat
gtcgcccgccggctggatatcctggccgaggaatacgagcgtggctggaccggcgaggcg
cgcgaggacggttcgctgctgttcgagcgcaccgtccgcggcgtgagggaggcgaccggc
gtcgaccacgcgctgctttcgtcggccgatgcccgcaagctcgacggtcattcccagcat
ctgcaggagatttacggcaaggcggcgatgctgcgccggcgcgagcaggaaatgccggtg
cgcggccccagcgcgctgctggatgcgatcttcgcccttggccgcaagggcattaccatg
cagcgctacaagggccttggcgagatgaacgccgagcagctctgggaaacgacgctcgat
ccctccatccgctcgctgctgcaggtgaaggtctccgaggcgatggaggccgacgacatc
ttcatgcgcctgatgggcgacgaggtggaaccgcgccgcgagttcatccagaccaacgcg
ctctcggtggcgaacctcgacgtttga
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