Hartmannibacter diazotrophicus: HDIA_0288
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Entry
HDIA_0288 CDS
T05217
Symbol
rsmB_1
Name
(GenBank) Ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
hdi
Hartmannibacter diazotrophicus
Brite
KEGG Orthology (KO) [BR:
hdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hdi03009
]
HDIA_0288 (rsmB_1)
Enzymes [BR:
hdi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
HDIA_0288 (rsmB_1)
Ribosome biogenesis [BR:
hdi03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HDIA_0288 (rsmB_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
Methyltransf_25
FtsJ
Methyltransf_11
Methyltransf_23
Methyltransf_12
MTS
Methyltransf_31
RsmF-B_ferredox
Cons_hypoth95
adh_short
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
SON53829
UniProt:
A0A2C9D0W5
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All DBs
Position
1:310862..312304
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AA seq
480 aa
AA seq
DB search
MNDAKARPSSSKGTGGAGRPKNKHGGAAGGARKDQAGPREADRTPLPPGHDLRALCADLL
SLVRKGELLDGLLEAGPLSQRFNALEIKDRALVRAIIGTALRRHGQIAEAIAACLDRPLP
QKAGALQSILAIGAAQVLFMDVADHAAIDIAVELAGRSRDTAKWKGLTNAILRRLQRERD
AILARQDEARLNTPGWLFEAWAKAYGTDTARAIAAMHLVEPSLDISVKSDPEGWQEKLGG
KLLPTGSIRLVAAGGVDQLPGYAEGAWWVQDAAAALPPLLLGDVAGKTVADLCAAPGGKT
ALLAARGAHVTAVDLSARRLKRLSANLDRLGLSADVVTADVATYAGGPFDAVLLDAPCSA
TGTIRRHPDLVLLKEPSDIEILAATQARLLHHAVDLVRPGGLLVYCTCSLQPEEGAAQID
ALIASGAPVERVPVRPEEIGGLAGAITPAGDLRTLPSMLPDADPHLAGLDGFFVARLRRR
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgatgccaaagcccgcccgtcttcctccaagggtacgggcggggccggaaggccg
aagaacaagcacgggggcgccgctggcggcgcgcggaaggatcaggccggtccgcgcgaa
gccgatcgcaccccactgcctccggggcatgatcttcgcgccctttgcgccgatcttctc
tccctcgtgcgcaagggcgagcttctcgacggcctgctcgaggcaggcccgctgtcgcag
cgcttcaatgcgcttgagatcaaggaccgggcgctggtgcgtgccatcatcggcacggcg
ctgcgccgccacggccagatcgccgaggcgatcgccgcctgcctcgaccgtccgctgcct
cagaaggccggcgcgttgcagtcgatcctggcgattggcgcggcgcaggttctcttcatg
gatgtcgccgaccatgcagccatcgacatcgcggtggaacttgccggtcggtcgcgcgat
acggcgaagtggaaggggctcaccaacgccatcctgcgccggctccagcgcgagcgcgat
gcgatccttgcccgtcaggatgaggcccggctgaacacgcccggctggctcttcgaggcc
tgggcgaaggcctacgggaccgacaccgcccgcgccatcgcggccatgcatctcgtcgag
cccagtctcgacatctccgtcaagtcggaccccgagggctggcaggaaaagctgggcggc
aagctgctgccgaccggatcgattcgcctcgtcgcggccggcggcgtcgaccagcttccc
ggctatgccgagggcgcctggtgggtgcaggatgccgccgccgccctgccgccgctgctg
cttggggatgtcgcgggcaagaccgttgccgatctgtgcgccgcgccgggcggcaagact
gcgctgctggccgcgcgcggcgcccatgtcacggcggtcgacctctccgcccgccgcctg
aagcgtctttccgccaatctcgaccggctgggtctttccgctgatgtggtgaccgcggac
gtcgcgacctacgccggcggtcccttcgatgccgtgctgctcgacgcaccctgttcggcg
accggcacgatccgccgccacccggatctggtgctcctgaaagaaccgtccgacatcgag
atcctggcggcaacgcaggcgcgcctgctgcaccacgccgtcgacctcgtgcggccgggt
ggtcttctcgtctactgcacctgttcgctgcagccggaggagggcgcggcccagatcgat
gcgctgatcgcgtccggcgcgccggtggagcgcgtccccgtccggccggaggagattggc
ggccttgccggggctatcacgccggcaggcgacctgcgcacgctgccctcgatgctgccc
gatgcggacccgcatcttgccggtctcgacggtttcttcgtcgcccggctccggcgccgg
taa
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