Hartmannibacter diazotrophicus: HDIA_0874
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Entry
HDIA_0874 CDS
T05217
Symbol
gspD
Name
(GenBank) putative general secretion pathway protein D
KO
K02280
pilus assembly protein CpaC
Organism
hdi
Hartmannibacter diazotrophicus
Pathway
hdi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hdi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HDIA_0874 (gspD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hdi02044
]
HDIA_0874 (gspD)
02035 Bacterial motility proteins [BR:
hdi02035
]
HDIA_0874 (gspD)
Secretion system [BR:
hdi02044
]
Type II secretion system
Tight adherence (Tad) export apparatus
HDIA_0874 (gspD)
Bacterial motility proteins [BR:
hdi02035
]
Pilus system
Pilus assembly proteins
HDIA_0874 (gspD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Secretin
T2SS-T3SS_pil_N
BON
Motif
Other DBs
NCBI-ProteinID:
SON54415
UniProt:
A0A2C9D4J5
LinkDB
All DBs
Position
1:complement(929179..930555)
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AA seq
458 aa
AA seq
DB search
MKSMFKSLLAAAMVATALLSPVGPASAADANYLSIASADQLSGRVINLGLNKSMVIDVPE
DIVDVLISNPTIADAVVRTKRKIYLIGNAVGETNIILFGQGNQQFAQFNISVARDTATLD
AMIAKLIPGSQVHVETINDSVILSGTVKTPAEAGKAAEIAEKYIGSAEKIVNMVSVAESD
QVHLKVVVAEVDRNIVKNLGIDTESILQNSAFALTATGSGPGGALFQNWGAEAAVSGTVD
TFIQALNQQGIVRTLAEPTLTATSGESANFLVGGEFPIPVSQDNNTITVEWKQFGISLAF
TPVVLTPGRISLRVKSEVSDLSTEGAITISGLTLNSLSVRRAESTVELPSGGSMVMAGLL
KDNLRQQVKGFPGLMDVPILGSLFKSKEFERNQTELAIFVSPYLVKPVAPSALQRPDKNF
APPSDAKAIFLNRLNRVYSSSANPPKGSYQGKIGFMFE
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcgatgttcaagagcctgctggcggcggcgatggtcgcaacggccctgctctcc
ccggtcggcccggcgagcgccgccgatgcgaactatctcagcatcgcctcggcagaccag
ctctccggacgggtgatcaacctcggcctcaacaagtcgatggtcatcgatgtgcccgag
gatatagtcgacgtcctgatctccaatccgaccatcgccgatgcggtcgttcgcaccaag
cgcaagatctacctgatcggcaatgccgtcggcgagacgaacatcatcctcttcggacag
ggcaatcagcaattcgcccagttcaatatttcggtggcccgcgacacagcgacactcgac
gccatgatcgccaagctcattccgggctcgcaggttcacgtcgagacgatcaatgacagc
gtcatcctgtccggcacggtcaagacgcccgccgaagccggcaaggcggccgaaatcgcg
gaaaaatacatcgggtcggccgagaagatcgtcaacatggtctcggtcgcggaatcggac
caggttcatctcaaggtcgttgtcgccgaagtcgaccgcaacattgtcaagaacctcggc
atcgacaccgagtccatccttcagaactccgccttcgccctcacggcgacaggctcgggt
cccggcggcgccctgttccagaattggggggccgaggcagcggtatccggcacagtcgac
accttcattcaggcactgaaccagcagggcatcgtgcgcaccctggcggagccgacgttg
accgcaacgtcaggagaatccgctaacttcctcgtcggcggcgaatttcccattcccgtc
tcgcaggacaacaacacgatcaccgtcgagtggaagcagttcggtatcagccttgccttc
actccggtggttctgacgcccggccgcatctccctgcgcgtcaagagcgaggttagcgac
ctttccacggaaggtgcgatcacgatcagcggcctgacactgaactctctttcggtgcgc
cgcgctgaatcgacggtcgagcttccgtccggcggatcgatggtgatggccggtctcctg
aaggacaatcttcgccaacaggtcaagggcttccccggcctcatggacgtgccgattctt
ggctcccttttcaagagcaaggaattcgagcgcaaccaaacggaactcgccatctttgtc
agcccctatctggtcaagccggtcgcgccgtcggcgctgcagaggccggacaagaacttt
gcacccccgagcgatgccaaggccatcttcctcaacaggctgaaccgcgtctacagcagc
tctgcaaacccgcccaagggcagctaccagggcaaaatcggtttcatgttcgagtga
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