Hartmannibacter diazotrophicus: HDIA_1007
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Entry
HDIA_1007 CDS
T05217
Symbol
groEL_1
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hdi
Hartmannibacter diazotrophicus
Pathway
hdi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HDIA_1007 (groEL_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hdi03019
]
HDIA_1007 (groEL_1)
03110 Chaperones and folding catalysts [BR:
hdi03110
]
HDIA_1007 (groEL_1)
03029 Mitochondrial biogenesis [BR:
hdi03029
]
HDIA_1007 (groEL_1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hdi04147
]
HDIA_1007 (groEL_1)
Enzymes [BR:
hdi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HDIA_1007 (groEL_1)
Messenger RNA biogenesis [BR:
hdi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HDIA_1007 (groEL_1)
Chaperones and folding catalysts [BR:
hdi03110
]
Heat shock proteins
HSP60 / Chaperonin
HDIA_1007 (groEL_1)
Mitochondrial biogenesis [BR:
hdi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HDIA_1007 (groEL_1)
Exosome [BR:
hdi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HDIA_1007 (groEL_1)
Exosomal proteins of other body fluids (saliva and urine)
HDIA_1007 (groEL_1)
Exosomal proteins of breast cancer cells
HDIA_1007 (groEL_1)
Exosomal proteins of colorectal cancer cells
HDIA_1007 (groEL_1)
Exosomal proteins of bladder cancer cells
HDIA_1007 (groEL_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
ChlI
Motif
Other DBs
NCBI-ProteinID:
SON54548
UniProt:
A0A2C9D313
LinkDB
All DBs
Position
1:complement(1086079..1087698)
Genome browser
AA seq
539 aa
AA seq
DB search
MSAKEIRFNGDARDRMLRGVEVLERTVKATLGPKGRNVILDRSYGAPRITKDGVTVAKEI
ELPDRFENMGAQMVREVASKTNDLAGDGTTTATVLAAAILREGSKLVAAGMNPMDLKRGI
DLAVAVVVKDIQARSRAVQSSSEIAQVGTIAANGDATVGAMIARAMEEVGKEGVITVEEA
KTAETELDVVEGMQFDRGYLSPYFVTNAEKMRVEFDEPYILIHEKKLGNLQTILPLLEAV
AQSGKPLVVLCEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAVVTAGRL
ISDDLGIKLENVTLDMLGRARRVQIEKDTTTIIDGFGEKADIEARVRQIKAQIEDTTSDY
DREKLLERQAKLSGGVAVIRVGGVTETEVKEKKDRIDDALNATRAAVEEGIVAGGGVALL
RARAALSTLSNDNADIRAGMSIVMRALEAPIRQIAENCGIDGPLVVGTLIQSNDPNQGFD
AQNEVYVDMIGAGIVDPAKVVRTALQDAASIAGLLITTEVMIADARQHGSTGDAPGMDY
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccaaggaaatcaggttcaacggcgatgcccgcgaccgcatgctgcgcggcgtc
gaggtgctggaacgcacggtcaaggcaacgcttggtcccaagggccgcaacgtcattctg
gacaggtcttatggcgcaccgcgcatcaccaaggacggcgtgaccgtcgccaaggagatc
gaactgcccgacaggttcgagaacatgggcgcgcaaatggtgcgagaggtcgcgtcgaag
accaacgaccttgcaggcgacggcacgacgacggcgaccgtccttgccgccgcaatcttg
cgcgaaggcagcaagctcgttgcggccggcatgaacccgatggatctcaagcgcggcatc
gatcttgccgtcgcggtcgtcgtcaaggacatccaggctcgctccagggccgtccagtct
tccagcgagatcgcccaagtcggaacgatcgccgccaatggcgatgcgacagtcggagcc
atgatcgcacgggcaatggaagaggtcggcaaggaaggcgtgatcactgtcgaggaggcc
aagacggcggaaaccgaactcgacgtcgtcgaaggcatgcagttcgatcgcggctatctc
tctccctatttcgtcaccaatgccgagaagatgcgcgtcgaattcgatgagccctatatt
ctcattcacgagaagaaactcggcaatctccagacaatcctgccgttgctcgaagccgtc
gcgcaaagcggcaaacctctggtcgtcctgtgcgaggacgtcgagggcgaagcgctggcg
acccttgtcgtcaacaagctgcgcggtggcctcaaggtcgcggcggtcaaggcgccaggc
ttcggcgaccgccgcaaggccatgcttgaggatatcgcggtcgtgacggccggtcggctc
atcagcgacgacctcggcatcaagctcgaaaatgtgacgctggacatgctgggacgggca
aggcgtgtccagatcgaaaaggacacgacgacgatcatcgacggcttcggcgagaaggcc
gacatcgaggcgcgcgtccggcagatcaaggcgcaaatcgaggacaccacgtccgactac
gaccgggagaaactgctggagcggcaggccaagctgtccggcggcgtcgccgtgatccgt
gtcggcggagtgaccgagaccgaggtcaaggaaaagaaggaccgcatcgatgatgcgctg
aacgcaacccgcgccgctgtcgaggaaggcatcgtcgccggcggcggtgtcgcccttctg
cgcgccagagccgccctttccacgctctcgaacgacaatgcagacatccgcgccggtatg
tcgatcgtgatgcgggcgcttgaagcgccgatccggcagatcgcggagaattgcggcatc
gatggcccgctggttgtgggcactctcatccagagcaacgatcccaaccagggcttcgat
gcccagaacgaggtttacgtcgacatgatcggcgcaggcatcgtcgatccggccaaggtc
gtgcgaacggctctgcaggatgcagcctcgatcgccggacttctgatcaccaccgaagtg
atgatcgcagatgcccggcagcatggatcgacgggcgatgccccgggcatggactactga
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