Hartmannibacter diazotrophicus: HDIA_1625
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Entry
HDIA_1625 CDS
T05217
Symbol
rsmB_2
Name
(GenBank) Ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
hdi
Hartmannibacter diazotrophicus
Brite
KEGG Orthology (KO) [BR:
hdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hdi03009
]
HDIA_1625 (rsmB_2)
Enzymes [BR:
hdi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
HDIA_1625 (rsmB_2)
Ribosome biogenesis [BR:
hdi03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HDIA_1625 (rsmB_2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltransf_31
Methyltransf_25
Methyltransf_24
Methyltr_RsmF_N
FtsJ
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
SON55166
UniProt:
A0A2C9D4F6
LinkDB
All DBs
Position
1:1759595..1760905
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AA seq
436 aa
AA seq
DB search
MRDGGRLAAAIEILEDLEKRRRPAQDALKDWGLGHRFAGSKDRNAIGNLVFDVLRRQSSL
SAIMGSDTVRARVLAAYALTWNRGLAGLDAVLDPDDRHAPPALSPDERRALEAPALPGDA
PDHVRANLPEWLIGSFRRALDDRLVAEGEALAARADVDLRVNTTKADRAAVLSALGPLDA
TPTPWSPIGVRVPVGEADAKAPHVVSEFAFKRGEFEVQDEGSQLASLIAAEGGATNVVDL
CAGGGGKSLALAARLGPSVRIHAYDNDKRRFGDILDRIARAGTQTIEIVEPRGPDPLAPL
DGTADLVVVDAPCTGTGTWRRRPDAKWRLAPGALATRLMQQDEVLDRAARLTRPGGRICY
ITCSLLPEENEDRLDAFLKRHPAFAVEDTAAFWQPVTGKPLPPHVGLAVGKGTGLRLSPY
LTSTDGFFVCLLRHRG
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgagggatggcgggcggcttgcagccgcaatcgagattctcgaagatttggagaaacgg
cgacgtccggcccaggatgccttgaaagactggggccttggccatcgctttgccgggtcg
aaggaccgcaatgccatcggcaatctcgtcttcgacgtgctgcggcgccagtcgtcgctg
agtgccatcatgggcagcgacacggtgcgggcgagggtgcttgcggcctatgcgctgacc
tggaaccggggtcttgccggtcttgacgccgtgctcgatccggacgaccgccacgcgccg
ccggctctttccccggacgaaaggcgcgcgctggaggcgccagcactgccgggtgatgcg
ccggaccatgtgcgggccaatctgcccgagtggctgatcggttcgttccgccgcgctctt
gacgaccggctcgtcgccgaaggtgaggcgctcgccgcaagggccgacgtggacctgcgc
gtcaacacgacgaaggccgaccgcgcggcggtcctctccgcactgggtccgctcgatgcc
acgccgacgccgtggtcgcccatcggtgtccgcgttcctgttggcgaggccgatgccaag
gcgccgcatgtcgtctccgaattcgccttcaagcgcggggaattcgaggttcaggacgaa
ggcagccagttggcctcgctgattgccgccgaaggcggggcgacgaacgttgtcgatctt
tgcgccggcggcggtggcaagtcccttgcgctcgcggcccgtctcggcccttcggttcga
attcacgcctacgacaacgacaagcgccgtttcggcgacatcctcgatcgcatcgcccgt
gcgggcacccagacgatcgagatcgtcgagccgcgcggccccgatccgctggccccgctc
gatggaaccgccgatctcgtcgtcgtcgacgcaccatgcaccggcacgggaacctggcgc
aggcgccccgacgccaaatggcggctggcacccggcgcgctggcgacgcgcctgatgcag
caggacgaggtgctggaccgcgcggcccggctgacccggccgggtgggcgaatctgctac
atcacctgctcgctgttgccggaagaaaacgaggaccgcctcgacgcttttctgaagcgc
catcccgcctttgccgtcgaggataccgcggcattttggcagccggtgactggaaagccg
ctgccgccccatgtcggccttgcggtgggcaagggaaccggcctgcgcctttcgccctat
ctgacctccacggatggcttcttcgtctgcctgctgcggcatcgtggctga
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