Hartmannibacter diazotrophicus: HDIA_2023
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Entry
HDIA_2023 CDS
T05217
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
hdi
Hartmannibacter diazotrophicus
Brite
KEGG Orthology (KO) [BR:
hdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hdi03032
]
HDIA_2023 (gyrA)
03400 DNA repair and recombination proteins [BR:
hdi03400
]
HDIA_2023 (gyrA)
Enzymes [BR:
hdi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HDIA_2023 (gyrA)
DNA replication proteins [BR:
hdi03032
]
Prokaryotic type
DNA Topoisomerases
HDIA_2023 (gyrA)
DNA repair and recombination proteins [BR:
hdi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HDIA_2023 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
SON55564
UniProt:
A0A2C9D5H0
LinkDB
All DBs
Position
1:2159936..2162725
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AA seq
929 aa
AA seq
DB search
MAEDNNDTPQGTGPSDIKPISIADEMRRSYLDYAMSVIVARALPDVRDGLKPVHRRILYS
MHENGYEWNKAYRKSARVVGDVMGKYHPHGDASIYDALVRLAQPWSMRLPLVDGQGNFGS
IDGDPPAAQRYTEVRLERVTNTMLDDLDKDTVDFSDNYDNSEREPTVMPARFPNLLVNGA
GGIAVGMATNIPPHNLGEVIDATVAMMENPAIEIEELIDIMPGPDFPTGALILGRSGIRS
AYMTGRGSIVMRGKVRIEEIRKDREAIIIDEIPYQVNKASMIEKIADLVREKRIEGISDI
RDESDRQGMRVVIELKRDAVADVLLNQLYRFSPLQSTFGVNMVALNGGKPELMNLKDVLS
AFVSFRENVVSRRTKFLLNKARDRAHILVGLAIAVANIDEVIKLIRSAPDPATARSQLME
RRWPASDVDSLIRLIDDPRHTVNEDGTYNLSEEQARAILDLRLQRLTALGRDEIGDELNK
LAAEISDYLDILRSRVRIQDIIRNELAEIRAMFANDRRTEIVESDADMDDEDLIAREDMV
VTVSHEGYIKRVPLSTYRAQRRGGKGRSGMSTKDEDFVTRLFVASTHTPVLFFSSRGIAY
KLKVWRLPIGNPQSRGKYFKNLLPLQDGERITSILALPEDETTWETLDVMFATTGGTVRR
NKLSDFVSVNRNGKIAMKLDEGEGIVSVETCTETDDVLLTTALGQCIRFETTQVRVFKGR
DSMGVRGISLADGDTVISMCILHHFEASPAERTEYLKRAGAARRAALGEDAELEAEDTAV
IDADEAAEGETEGELSYDRYIAMGAAEQFVLTVNEKGYGKRSSSYDFRTSGRGGKGIKAT
DQTKLKEIGNLVATFPVENADQIMLVSNGGQLIRVPVDGIRFASRASKGVRIFATGADEK
VVSVEHLSEVEEDEGEEGGVTETGPATDE
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
ttggcagaagacaacaacgatacgccgcaaggcaccggcccgtctgacatcaagccgatt
tccatcgctgacgagatgcgccgcagctatctcgactacgcgatgagcgtgattgtcgcc
cgcgcgcttcctgatgtgcgcgacggcctgaagcctgttcatcgccgcatcctctattcg
atgcacgagaacggctacgagtggaacaaggcttaccgcaagtctgctcgcgtggtcggc
gacgtcatgggtaaataccatccccatggtgacgcctcgatctacgacgcgctggtgcgt
ctcgcgcagccgtggtcgatgcggctgccgctggtcgacggacagggcaacttcggctcg
atcgacggtgatccgcctgcggcccagcgctataccgaggtccgtcttgagcgcgtgacg
aacacgatgctcgacgatctcgacaaggacacggtcgatttctccgacaactacgacaat
tcggaacgcgagccgacggtcatgccggcgcgtttcccgaacctgctcgtcaatggcgct
ggcggcatcgccgtcggcatggcgacaaacattccgccgcacaatctcggtgaggtgatc
gacgccaccgtcgccatgatggaaaatcccgcgatcgagatcgaggaactgatcgacatc
atgcccggtccggatttcccgaccggtgcgttgatcctcggccgctcgggcattcgctcg
gcctatatgaccgggcgcggttccatcgtcatgcgtggcaaggtccgcatcgaggaaatc
cgcaaggatcgcgaagcgatcatcatcgacgagattccctatcaggtgaacaaggcgtcg
atgatcgagaagatcgccgaccttgtgcgcgagaagcggatcgagggcatctcggatatc
cgcgacgagtccgaccgtcagggcatgcgcgtcgtgatcgagctgaagcgggatgccgtt
gccgacgtgctcctcaaccagctctatcgcttctcgccgctgcaatcgaccttcggcgtc
aacatggtggcgctcaacggcggcaagccggaactgatgaacctcaaggacgtgctgtcg
gcgttcgtcagcttccgcgagaatgtcgtcagccggcgcaccaagttcctcctgaacaag
gcgcgcgaccgggcgcatatcctcgtgggtctggcgatcgcggtcgccaacatcgacgag
gtcatcaagctcatccgcagcgcgccggacccggcaacggcccgcagccagcttatggag
cggcgctggccggcgtcggatgtcgattcgctgatcaggctgatcgacgatccgcgccat
acggtgaacgaggacggcacctacaacctctccgaagagcaggcccgtgccatcctcgac
ctgcgcctgcagcgtctgacggcactcggccgtgacgagatcggcgacgagctgaacaag
ctggcagccgagatttccgactatctcgacattctgcgctcgcgtgtccgcatccaggac
atcatccgcaacgagctggccgaaatccgcgcgatgttcgccaacgatcgccgcacggag
atcgtcgagagcgacgcggacatggacgacgaggacctgattgcccgcgaggacatggtg
gtcaccgtcagccacgagggctacatcaagcgcgtgccgctctcgacctaccgggcccag
cgtcgcggcggcaagggccgctcgggcatgtcgacgaaggacgaggatttcgtcacccgg
ctgttcgtcgccagcacccacacgccggtgctcttcttctcctcacgtggcattgcctac
aagttgaaggtctggcgcttgccgatcggcaatccgcaatcgcgcggcaagtatttcaag
aacctgctgccgcttcaggatggcgagcggattacgtccatcctggcgttgcccgaggac
gagacgacctgggagacgctggacgtcatgttcgccacgaccggtggcaccgtccggcgc
aacaagctctccgatttcgtctccgtgaaccgcaacggcaagatcgccatgaagctcgac
gagggcgagggcatcgtctccgtggagacatgcaccgagaccgacgacgtgctcctgacg
actgcgcttggacagtgcatccgcttcgagacgacgcaggtacgcgtgttcaagggacgc
gattccatgggcgtgcgcggcatctcgctggctgatggcgacaccgtcatctcgatgtgc
atcctgcatcatttcgaggcgtctccggccgagcggacggaatacctcaagcgtgccgga
gcggcgcggcgtgcggccctgggcgaggatgccgagctcgaggccgaggatacagcggtc
atcgacgccgatgaggctgccgaaggcgagaccgagggcgagctgtcctacgaccgctat
atcgccatgggggctgccgagcagttcgttctcaccgtcaacgagaagggttacggcaag
cggtcgtcgtcctacgacttccgcacgtcgggtcgcggcggcaagggcatcaaagcgacg
gaccagaccaagctgaaggaaatcggcaacctcgtcgccaccttcccggttgagaatgcc
gaccagatcatgctggtctcgaatggcggccagctcatccgcgtgcccgtcgacggcatt
cgcttcgccagccgcgcctcgaagggcgtgcgcatctttgccaccggagcggacgaaaag
gtcgtctccgtcgagcatctctccgaggttgaggaggatgagggcgaagagggcggcgtt
accgaaacgggccccgccacagacgagtga
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