Hartmannibacter diazotrophicus: HDIA_2035
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Entry
HDIA_2035 CDS
T05217
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
hdi
Hartmannibacter diazotrophicus
Brite
KEGG Orthology (KO) [BR:
hdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hdi03032
]
HDIA_2035 (hup)
03036 Chromosome and associated proteins [BR:
hdi03036
]
HDIA_2035 (hup)
03400 DNA repair and recombination proteins [BR:
hdi03400
]
HDIA_2035 (hup)
DNA replication proteins [BR:
hdi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HDIA_2035 (hup)
Chromosome and associated proteins [BR:
hdi03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HDIA_2035 (hup)
DNA repair and recombination proteins [BR:
hdi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HDIA_2035 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Glycos_trans_3N
DUF2267
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Rpf1_C
Motif
Other DBs
NCBI-ProteinID:
SON55576
UniProt:
A0A2C9D5K0
LinkDB
All DBs
Position
1:2174500..2174775
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AA seq
91 aa
AA seq
DB search
MNKNDLIAQVAEKADLTKAQAGQAVDALFDAITASLKTGDEVRIVGFGNFVVTERAATEG
RNPQTGATIQIPASKQPKFRAGKGLKDAVNG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaatgacttgatcgcgcaggtcgccgagaaggctgatctgaccaaggctcag
gccggtcaggccgttgacgcgctcttcgatgcgatcacggcttccctgaagaccggcgac
gaagtgcgcatcgtcggcttcggcaactttgtcgtcaccgagcgtgccgccactgagggc
cgtaacccccagacgggcgcgacgatccagatcccggcctccaagcagccgaagttccgt
gctggcaagggtctcaaggacgccgtcaacggctga
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