Hartmannibacter diazotrophicus: HDIA_2353
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Entry
HDIA_2353 CDS
T05217
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hdi
Hartmannibacter diazotrophicus
Brite
KEGG Orthology (KO) [BR:
hdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hdi03009
]
HDIA_2353 (rimO)
Enzymes [BR:
hdi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HDIA_2353 (rimO)
Ribosome biogenesis [BR:
hdi03009
]
Prokaryotic type
ribosomal protein modification factors
HDIA_2353 (rimO)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
SON55894
UniProt:
A0A2C9D6E5
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All DBs
Position
1:complement(2498258..2499613)
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AA seq
451 aa
AA seq
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MSLEQNKAAPASADGAAPKISFVSLGCPKALVDSERIITHLRSEGYEIGRKHDGADVVIV
NTCGFLDSAKAESLGAIGEAMKENGRVIVTGCMGAEPEQIREKFPDVLAITGPQAYESVM
SAVHTAVPPRHDPYVDLVPPQGIKLTPRHYAYLKISEGCSNRCSFCIIPSLRGDLVSRPI
TDVLREAEKLVKAGVKELLVISQDTSAYGVDLKYAPGLWQDREVRTRFFDLARELGQMGV
WVRLHYVYPYPHVDEVIPLMAEGLVLPYLDIPFQHASPTVLKAMRRPAHQEKTAGRIAKW
RGVCPDLAVRSTFIVGFPGETDEDFEMLLDWLTEAKLERVGCFKYEPVAGAKANDLGLEA
VPEEVKERRWHRFMAHQQAISQKILKSRVGKRLQVIVDETQGTVAKGRSKWDAPEIDGTV
HLSSRRPIRAGDIVTVKIDSADAYDLHGTVV
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgagccttgagcagaacaaagccgcgccggcctcggccgacggtgccgccccgaagatt
tccttcgtcagcctcggctgcccgaaggcgctcgtcgactcggagcggatcatcacgcac
ctgcgttccgagggttacgagatcggccgcaagcatgacggcgccgacgtcgtgatcgtc
aacacctgcggcttcctcgacagcgccaaggcggaaagcctcggggccatcggcgaggcg
atgaaggaaaacggccgggtgatcgtgaccggctgcatgggcgcggagccggaacagatc
cgcgagaaattcccggacgtgctcgcgatcaccggtccgcaggcctacgagagcgtgatg
agcgcggtgcatactgccgtgccgccgcgtcacgacccttatgtcgatctggttccgccg
caggggatcaagctcaccccgcgtcactatgcctatcttaaaatttccgaaggctgcagc
aaccgttgcagcttctgcatcatcccgagcctcaggggcgatctcgtttcgcgcccgatc
accgatgtgctgcgggaggccgagaaactggtcaaggccggcgtcaaggaactcctggtt
atcagccaggacacgtccgcctacggcgtcgacctcaaatatgcgccgggtctttggcag
gaccgcgaggtgcgcacgcgcttcttcgaccttgcccgcgaactcggccagatgggcgtc
tgggtgcggcttcactacgtctacccgtacccccacgtcgatgaggtcatcccgctgatg
gccgagggtctcgtgctgccctatctcgacattccgttccagcatgcctcgccgaccgtg
ttgaaggcgatgcgcaggccggcccatcaggagaagacggccgggcgcattgccaagtgg
cgcggggtctgcccggatcttgccgtgcggtcgaccttcatcgtcggcttccccggcgag
acggacgaggatttcgagatgctgctcgactggctgacggaggccaagctcgagcgcgtc
ggctgcttcaaatacgagcccgtcgcgggcgcgaaagcgaacgaccttgggctggaagcg
gttcccgaggaggtcaaggagcgccgctggcaccgcttcatggcgcatcagcaggccatt
tcgcagaaaatcctgaaatcgcgggtcggcaagcggctgcaggtgatcgtcgacgagacg
caggggacggtcgccaaagggcgctccaagtgggacgcgccagagatcgacggcaccgtg
catctttcctcgcgccggccgatccgggcgggcgacatcgtcacggtcaagatcgactcc
gccgatgcctacgatctccacggaacggtggtctga
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