Hartmannibacter diazotrophicus: HDIA_2450
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Entry
HDIA_2450 CDS
T05217
Name
(GenBank) bacteriocin biosynthesis docking scaffold, SagD family
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
hdi
Hartmannibacter diazotrophicus
Brite
KEGG Orthology (KO) [BR:
hdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hdi03009
]
HDIA_2450
Ribosome biogenesis [BR:
hdi03009
]
Prokaryotic type
ribosomal protein modification factors
HDIA_2450
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Ortholog
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GFIT
Motif
Pfam:
YcaO
Motif
Other DBs
NCBI-ProteinID:
SON55991
UniProt:
A0A2C9D8B4
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All DBs
Position
1:2621739..2623079
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AA seq
446 aa
AA seq
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MSKIPILNARHGEAAGTGIDASKEAGDISALGFGLPLPPGDRQILQLLALFDLEVEIIPL
FGLYLATTNLADPSGPITASGFGFDPPTAIRRCLGECAEIVSSRFDAQTDRSRIVSSTHG
PRLDIQQCLGFSLRQRHHREDFDRLCAGHDSLPPDAIMDETGHWCQVERLGDGAPAFVPA
FCLFSNFGLAVLGEPNTAADSNGLAAGTSPDDAALRAVAELVERDAAGRWWWSQRQCAAL
MPEAGEGAFIEHLARHEAETGRRSWFLHLGSLAGLHAVAGISAELDGGRVSVGLGCADDP
AKAKEKAFLESVQHDLAIRGAELRAARGGPLSARDRLLMQWGASATTATMPHLLPAGVTT
IGERNVTKEDLAVPSPSTAAAALEAIGIDVFIFRLTRPDIGIDVVRAIAPGLAHYKPRFG
SMRLLDVASEGNLTERLAAGWPLLTI
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaaaattcccattttgaacgcccgccacggtgaggcggccgggaccgggatagat
gcttcgaaggaggccggagacatttcggcgttgggattcggcctgccactgccgcctggc
gaccgtcagattctgcaactgctggccctgttcgaccttgaggtcgagatcattccgctc
ttcggcctgtatctcgcgacaacgaacctggccgatccgtcaggcccgatcacggccagc
ggattcggcttcgacccgccgacggcaatccgccgatgcctcggcgaatgcgccgagatc
gtcagcagccggttcgatgcgcagacggaccggagccgcatcgtttcctcaacccatggc
ccaaggctcgatatccagcagtgcctcggcttttccttgcggcaacggcatcaccgggaa
gacttcgaccgcctttgcgccggccatgacagcctgccgccggacgcgatcatggacgag
accggtcattggtgtcaggtcgagcggctcggcgacggcgcgcccgccttcgtgccggcc
ttctgccttttcagcaatttcgggcttgcggttctcggtgagccgaacaccgctgccgac
agcaacggtcttgctgccggcaccagtcccgacgacgccgcccttcgtgccgtcgccgaa
ctcgtcgagcgcgacgccgctggccgctggtggtggtcgcagcgccagtgcgccgcgctg
atgccggaggcgggcgagggcgccttcatcgagcatcttgcaagacacgaggccgaaacg
ggacgaagaagctggttccttcatctcggcagcctcgccgggctgcatgcggttgccggg
atctcggccgaactggatggaggccgggtctcggtggggcttggctgcgcggacgatccg
gccaaggccaaggaaaaggcctttctggaatccgtccagcacgatctcgccatccgcggc
gccgaactgagggccgcccgcggagggccgttgagcgcacgggaccgcctcctgatgcaa
tggggagcaagcgccacgacggcgacaatgccccacctcctgccggccggggtgaccaca
atcggcgagcgcaacgtgacgaaggaagacctcgcggtgccatcgccatccactgcggcg
gccgcgttagaggcaatcggcatcgacgtcttcatctttcgcctgacccggcccgacatc
ggcatcgacgtggtcagggccatcgcccccgggcttgcccattacaagccgcgcttcggc
tcaatgcggcttctggatgttgccagcgaaggcaatctgacagaaaggctggccgccgga
tggccgctcctgacgatctga
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