Hartmannibacter diazotrophicus: HDIA_2455
Help
Entry
HDIA_2455 CDS
T05217
Symbol
rnd_2
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
hdi
Hartmannibacter diazotrophicus
Brite
KEGG Orthology (KO) [BR:
hdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hdi03016
]
HDIA_2455 (rnd_2)
Enzymes [BR:
hdi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
HDIA_2455 (rnd_2)
Transfer RNA biogenesis [BR:
hdi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HDIA_2455 (rnd_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
SON55996
UniProt:
A0A2C9D6T1
LinkDB
All DBs
Position
1:2627305..2628459
Genome browser
AA seq
384 aa
AA seq
DB search
MKMITTTPDLGAACDELSRHEFITVDTEFLRETTFWPKLCVIQMAGPETAYVIDALAEDI
DLSPFFALMRDERVLKVFHAARQDIEIIWHRGGFVPSPIFDTQVAAMVCGYGDSISYDQL
VGRITGAQIDKTHRFTDWSRRPLSEAQIEYAVADVTHLRDVYASLKKSLDKRQRTDWVSE
EMKVLTSESTYRSDPEDAWRRLKMRVRKSQELLIMQAVAAWREREAQSRDVPRSRVIKDD
AIYEISTQAPKDAQALGRLRTVPNGFERSRAGGEIVAVVQEALTTPKDEWPQIPRGRPSP
EGAGAAVDLMKVLLKLVADNEGVAAKVIATVDDLEQIAANDDADVEALKGWRRELFGDLA
LKLKHGELGLSFDGKKVVTIERGE
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgatcacgacaacgcccgacctcggggcggcctgcgacgagctttcccgccac
gaattcatcaccgtagacactgaattccttcgcgagacgaccttctggccgaaactgtgc
gtgattcagatggcggggcctgagacggcctatgttatcgacgccctcgccgaggatatc
gacctttctcccttcttcgcgctgatgcgcgatgagagggtgctgaaggtctttcacgct
gcccggcaggacatcgagatcatctggcaccggggcggctttgtcccctccccgatcttc
gacacccaggtcgcggcgatggtctgcggctacggcgattcgatctcctacgatcaactc
gtcggtcggatcaccggggcgcagatcgacaagactcaccgcttcaccgactggtcgcgc
cgtccgctcagcgaggcgcagatcgaatatgccgttgccgacgtgacccatcttcgggat
gtctatgcgtccctgaagaagagcctagacaagcggcagcggaccgactgggtgagcgag
gagatgaaggtgctcacctcggagagcacctatcgctccgatcccgaagatgcctggcgg
cgcctgaagatgcgcgtgcgcaagtcgcaggaactcctgatcatgcaggcggtcgcagcc
tggcgcgagcgcgaggcgcagtcccgcgacgtaccgcgcagccgcgtcatcaaggacgat
gccatctacgagatatcgacccaggccccgaaggatgcccaggctctcggccggctgagg
acggtgccgaacggtttcgaacgctcgcgggccggcggcgagatcgtcgccgtggtgcag
gaggccctcacgacccccaaggacgagtggcctcagatcccgcgcggacgcccgtcgccc
gaaggtgccggcgctgctgtcgacctcatgaaggtgctcttgaagctcgttgccgataac
gagggcgtcgcagccaaggtgatcgccaccgtcgacgacctggagcagatcgctgcgaac
gatgacgccgacgtcgaggccctgaagggctggcggcgggaactcttcggtgacctcgcc
ctcaagctgaagcacggtgaactcggcctcagcttcgacggcaagaaggtcgtgacgatc
gagcgcggcgagtaa
DBGET
integrated database retrieval system
