Hartmannibacter diazotrophicus: HDIA_2757
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Entry
HDIA_2757 CDS
T05217
Name
(GenBank) uracil-DNA glycosylase, family 4
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hdi
Hartmannibacter diazotrophicus
Pathway
hdi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HDIA_2757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hdi03400
]
HDIA_2757
Enzymes [BR:
hdi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HDIA_2757
DNA repair and recombination proteins [BR:
hdi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HDIA_2757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
SON56298
UniProt:
A0A2C9D840
LinkDB
All DBs
Position
1:2953926..2954615
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AA seq
229 aa
AA seq
DB search
MNRTALFPFPDVDPGRDCPLCPRLVAFRQSARAEFPDWHNAPVPTFGAADASLLVVGLAP
GLRGANRTGRPFTGDYAGDLLYDTLIRFGFAAGSFEARIDDSLTLVGAAVTNAVRCVPPE
NKPVGAEINACRPFLTETIGKFRNLKAIVALGRIAHDSTLKALKPFLSASPSAYTFSHGA
MHRLSGPNGPLLFADSYHCSRYNTNTGRLTPEMFRDVFSAVRAEIDSTS
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgaaccggacggccttgttcccgtttcccgacgtcgatccggggcgtgactgcccgctc
tgcccgcgtctggtggcctttcgccagtcggcacgagcggaatttcccgactggcacaat
gcaccggtcccgacattcggtgcggccgacgccagcttgctggtcgtgggcctcgcgccg
ggcctgcgcggcgccaaccggaccggacgccccttcacgggcgactatgccggcgacctc
ctctacgacacgctgatccgcttcggcttcgccgccggcagcttcgaggcaaggatcgac
gacagcctgacgctggtcggcgccgcagtcaccaacgcggtgcgctgcgtgccgccggaa
aacaagccggtcggcgccgaaatcaacgcctgccggcctttcctcaccgagacgatcggg
aaattccgaaatctcaaggccatcgtcgcccttggacgcatcgcccacgattcgaccctg
aaagcgctgaagccattcctgtcggcatcgccgtcggcctatacctttagccatggcgcc
atgcatcgcttgagcgggccgaacggtcccctgctcttcgccgacagctatcactgctcg
cgctacaacacgaacaccgggcgcctgacgccggagatgttccgcgacgtcttctccgcc
gtccgcgccgagatcgacagcacctcctga
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