Hartmannibacter diazotrophicus: HDIA_2979
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Entry
HDIA_2979 CDS
T05217
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine-D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
hdi
Hartmannibacter diazotrophicus
Pathway
hdi00470
D-Amino acid metabolism
hdi00550
Peptidoglycan biosynthesis
hdi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hdi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HDIA_2979 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HDIA_2979 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hdi01011
]
HDIA_2979 (murD)
Enzymes [BR:
hdi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
HDIA_2979 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
hdi01011
]
Precursor biosynthesis
Amino acid ligase
HDIA_2979 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
TrkA_N
NAD_binding_2
IlvN
NAD_binding_7
ELFV_dehydrog
CbiA
Motif
Other DBs
NCBI-ProteinID:
SON56520
UniProt:
A0A2C9D8L4
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All DBs
Position
1:complement(3209436..3210839)
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AA seq
467 aa
AA seq
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MIAVTSFAGMRVAVFGLGGSGLATARALIAGEAKVTAWDDSSESLEKAAAEGIPTQDLKD
ADFSAFAALVLAPGVPLTHPKPHWVVEKAKAAEVEIIGDIELFARERRKISPASPFIAIT
GTNGKSTTTALIAHMLKAAGRDVQMGGNIGMPILSLDPLTPDRVYVIECSSYQIDLAPTV
DPTVAVLLNLTEDHLDRHGTMEHYAEVKERLVQRAGLAVIGVDDNWSASIADRRAASGLP
LKRISTKGSVKDGVWAIGQRVVEPFGLAQTVIIDLSQHPVLRGAHNAQNTAAAVAATRGI
HIGLDEVRSGIMSFPGLAHRMEPIGKIGSVTIVNDSKATNSDAAGKALSSYPRIHWIAGG
KPKTGGIEDLAPFFPRIAKAYLIGEAAEAFAKTLEGKVPYEICQTLDVAVPMAIEEAATE
GGGHPSVVLLSPACASFDQYRNFEVRGDAFRALALAVDGVVPFPEVH
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcagtcacgagttttgccggaatgcgggtcgcggttttcggtctcggagggtcc
gggctggcgacggcgcgtgcgctcattgccggcgaagccaaagtcacggcctgggacgac
agctccgaaagcttggagaaggcggcggccgagggcattccgacccaggatctgaaggac
gccgatttctcggccttcgccgcgctcgtgcttgcgcccggcgtgccgctgacgcatccg
aaaccccactgggtggtcgagaaggccaaggctgccgaagtcgagatcatcggcgacatc
gagcttttcgcccgcgagcggcgcaagatttcgccggcaagccccttcatcgccatcacg
gggacgaacggcaagtcgacgaccacggcgctaatcgcccacatgctcaaggcggccggc
cgcgatgtgcagatgggcggcaacatcggcatgcccatcctctcgctcgacccgctgacc
ccggatcgggtctatgtgatcgaatgctcgtcctaccagatcgacctcgcgccgaccgtc
gatccgacggtggctgttctgctcaatctcaccgaggatcatctcgatcgccacggcacg
atggagcactacgccgaggtgaaggagcggctcgtgcagcgggccggcctcgcagtgatt
ggcgtcgacgacaactggagcgcctcgatcgccgaccggcgtgcggcgagcggtcttccg
ctgaagcgcatttccaccaagggatccgtcaaggacggggtctgggccatcggccagcgc
gtggtggagcctttcggtcttgcccagacggtgatcatcgatctttcccagcatcccgtg
ctgcgcggcgcccacaatgcccagaacacggcggcggcggtcgcggcgacacgaggcatc
catatcggcctcgacgaggtgcgctcgggcatcatgtcgttcccgggccttgcccaccgg
atggaaccgatcggcaagatcgggtcggtgacgatcgtcaacgattccaaggccacgaac
tcggatgccgccggcaaggcgctttcgagctatccgcgcatccactggatcgccggcggc
aagccgaagaccggcggcatcgaagaccttgcgcccttcttcccccgcatcgccaaggcc
tatctgatcggcgaagccgcggaggcttttgccaagactctcgagggcaaggttccttac
gagatctgccagacgctggacgtcgccgtccccatggccatcgaggaagcagcgaccgag
gggggcgggcatccgagcgtcgtcctgctctcgccggcctgcgccagctttgaccagtac
cggaatttcgaggtgcggggcgatgccttccgcgcgcttgccctggccgttgacggcgtc
gttcctttcccggaggtccactga
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