Hartmannibacter diazotrophicus: HDIA_3870
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Entry
HDIA_3870 CDS
T05217
Symbol
groEL_3
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hdi
Hartmannibacter diazotrophicus
Pathway
hdi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HDIA_3870 (groEL_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hdi03019
]
HDIA_3870 (groEL_3)
03110 Chaperones and folding catalysts [BR:
hdi03110
]
HDIA_3870 (groEL_3)
03029 Mitochondrial biogenesis [BR:
hdi03029
]
HDIA_3870 (groEL_3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hdi04147
]
HDIA_3870 (groEL_3)
Enzymes [BR:
hdi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HDIA_3870 (groEL_3)
Messenger RNA biogenesis [BR:
hdi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HDIA_3870 (groEL_3)
Chaperones and folding catalysts [BR:
hdi03110
]
Heat shock proteins
HSP60 / Chaperonin
HDIA_3870 (groEL_3)
Mitochondrial biogenesis [BR:
hdi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HDIA_3870 (groEL_3)
Exosome [BR:
hdi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HDIA_3870 (groEL_3)
Exosomal proteins of other body fluids (saliva and urine)
HDIA_3870 (groEL_3)
Exosomal proteins of breast cancer cells
HDIA_3870 (groEL_3)
Exosomal proteins of colorectal cancer cells
HDIA_3870 (groEL_3)
Exosomal proteins of bladder cancer cells
HDIA_3870 (groEL_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF4678
Motif
Other DBs
NCBI-ProteinID:
SON57411
UniProt:
A0A2C9DCG1
LinkDB
All DBs
Position
1:complement(4184436..4186067)
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AA seq
543 aa
AA seq
DB search
MSKLLLHNSAARKALARGVAQLAAAVEPTLGPKGLNAMIDRPIGTPMITRDGVSIASEIE
LSDRFENMGAQVVREVSMQTNEIAGDGTTTAIVLANALIQSGVTAADRGSKAVDLCKGIN
LAVEEVTKALSLSARATQGNGMLRAVANIAATDPKLGALVADAFESVGAEGVISTDFSVT
TETWLDVVEGMSFDRGYLSHHMVTDQEKMEAVLERPLILMTDLKIKDPASLDTARAIAAK
AGRPLLIIAEEVSPEVVVTLLGKEGPGRYLVIHPPEYGHWRKAMMEDLAILTGGRVIARD
LGGALEAVTADDLGGAERVRTSASYTTVVGGEGDRNAIVARRAQVQRQYEAAPPNIEQDK
LRERLAKLSGGTAVLYAGGVTPVEQKRTIQLIEDSLSAVRAAFEEGVVAGGGSALAQMGP
VLAALEGTVEGDVREGVGLVRSVLTRPLWRIATNAGQDADTIVTEVSRVNGGYGFDAASG
TFVNMYEAGIIDPVRVTISALRNAASVATLIMTTETLVGDLPEHFDPTAGAALGGGAELL
GRA
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaattgctgcttcacaattccgcggcccgcaaagccctggcgcggggcgtcgcc
cagcttgcggccgccgtcgagccgacgctcggtccgaagggcctcaatgccatgatcgac
aggccgatcggcacgccgatgatcacgcgtgacggtgtcagcatcgccagcgagatcgaa
ctgtcggaccgcttcgaaaacatgggggcgcaggtcgtccgcgaggtctccatgcagacc
aacgagattgccggcgacgggacgacgaccgcgatcgtccttgccaacgccctgatccag
agtggagtcacggcggccgatcgcggcagcaaggccgtcgacctgtgcaagggcatcaat
cttgccgtcgaggaggtcaccaaggccctgtcgctgtcggcgcgggcaacccagggcaat
ggcatgctccgggccgtcgccaatatcgccgcgaccgacccgaagctcggtgcgcttgtc
gccgatgccttcgagagcgtcggcgccgagggcgtgatctcgaccgacttcagcgtcacc
accgagacgtggctggatgtggtcgagggcatgtccttcgaccgcggttatctctcccac
cacatggtgaccgaccaggagaagatggaagctgttcttgagcgccccctgatcctgatg
acggacctgaagatcaaggacccggcctcgctcgataccgcccgcgcgatcgcggccaag
gccggacggccgctgctgatcatcgccgaagaggtgtcgcccgaagtggtggtcacgctg
ctcggcaaggagggccccggccgctacctcgtgatccatccgccggaatacggccattgg
cgcaaggcgatgatggaggatctcgccattctcaccggcggccgcgtcatcgcgcgcgac
ctcggcggggcgctggaagcggtgacggcggacgatcttggcggggccgagcgggtgcgc
acgagcgccagctatacgaccgtcgtcggcggcgaaggcgaccggaacgcgatcgtcgcg
cgccgggcccaggtccagcgccagtatgaggcggcgccgccgaatatcgagcaggacaag
ctgcgcgagcgccttgccaaactctcgggcgggacggcggtgctctatgccggcggcgtc
acccccgtggagcagaagcgcaccatccagcttatcgaggattccttgagtgccgtccgc
gcggccttcgaggagggggttgttgccggcggcggctcggcgctcgcccagatggggcct
gtcctcgccgcgctggaggggacggtcgagggcgatgtccgcgagggtgtcggtctcgtg
cgctcggtgctgacgcgtccgctgtggcggatcgccaccaacgccggccaggacgccgac
acgatcgtcaccgaggtgagccgcgtcaacggcggctacggcttcgacgcggcgagcggc
acctttgtcaacatgtatgaggcaggcattattgatcctgttcgcgtgacgatctccgcg
ctcaggaacgcggcgtcggtcgcgacgctcatcatgaccaccgagaccctcgtcggcgat
ctgcccgaacatttcgatccgaccgcaggggcggcgcttggcggcggcgcggagctgctc
ggccgggcctga
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