Hartmannibacter diazotrophicus: HDIA_4001
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Entry
HDIA_4001 CDS
T05217
Symbol
ffh
Name
(GenBank) Signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
hdi
Hartmannibacter diazotrophicus
Pathway
hdi02024
Quorum sensing
hdi03060
Protein export
hdi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HDIA_4001 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HDIA_4001 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HDIA_4001 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hdi02044
]
HDIA_4001 (ffh)
Enzymes [BR:
hdi01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
HDIA_4001 (ffh)
Secretion system [BR:
hdi02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HDIA_4001 (ffh)
Eukaryotic Sec-SRP protein
HDIA_4001 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_33
Zeta_toxin
AAA_17
AAA_30
AAA_22
DnaB_C
AAA_19
ArsA_ATPase
AAA_14
Thymidylate_kin
AAA_31
AAA_5
AAA_16
AAA_7
6PF2K
APS_kinase
AAA
ResIII
AAA_18
AAA_24
ATPase_2
NACHT
nSTAND_NTPase5
DASH_Hsk3
Motif
Other DBs
NCBI-ProteinID:
SON57542
UniProt:
A0A2C9DB41
LinkDB
All DBs
Position
1:4326875..4328413
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AA seq
512 aa
AA seq
DB search
MFETLSDRLSGIFDKLTRRGALSEADVSEAMREVRRALLEADVALDVVKSFTDKVRNRAI
GAEVVKSVTPGQMVVKIVHDQLVEMLGSDAKPIDLHAVAPVPILMVGLQGSGKTTTTSKI
ARRLTERDRKKVLMASLDTRRPAAMEQLKILGEQNSVDTLPIVPGQTAVQIASRAINAAK
LGGYDVVILDTAGRVTVDQELMAEVAEVKRQTNPHEVLLVADALTGQDAVNTARAFDEQV
GVTGIVLTRVDGDGRGGAALSMRAVTGKPIKLMGVGEKSDALEDFHPSRVADRILGMGDI
VALVEKAAANFDADQAAKMAKKMQKGEFDLDDLAEQLRQMQKLGGMSGIMGLMPGMGKMK
NQIAAAGFDDKHIKRQIAIVQSMTKKERAKPALLDAKRKRRVAAGSGTDVSDINKLLKMH
RQMADMMKKMGRQKGGMLGKMLGGLGGGMPNMGDVDPAVLDQVARDAGLGGPDALKNAMK
GMPGGLPTGLPGMGGMPRLPGLPGLGKGPKGK
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaccctttcggatcgcctttccggcattttcgacaagctcacccgccgcggt
gcgctgtcggaagccgacgtgtccgaagcgatgcgcgaagtccgccgcgccctgctcgag
gccgacgtggcgctcgacgtcgtcaagtccttcaccgacaaggtccgcaatcgcgccatc
ggcgccgaggtggtcaagtccgtcacccccggccagatggtcgtcaagatcgtccacgac
cagctcgtggaaatgctcggctccgacgccaagcccatcgaccttcatgccgtcgccccg
gtgccgatcctgatggtcggcctgcagggctcgggcaagacgacgacgacctccaagatc
gccaggcgcctgaccgagcgtgaccgcaagaaggtcctgatggcctcgctcgacacgcgc
cgcccggccgcgatggagcagctcaagatcctcggcgagcagaacagcgtcgacaccctg
ccgatcgttcccggccagaccgccgtgcagatcgcaagccgtgcgatcaatgcggccaag
ctcggcggctacgacgtcgtcatcctcgacaccgccggccgcgtcaccgtcgatcaggaa
ctgatggccgaggtcgccgaggtcaagcgccagacgaacccgcacgaggtgctgctcgtc
gccgacgccctcaccggccaggacgccgtcaacacggcgcgcgccttcgacgagcaggtg
ggcgtcaccggcatcgtgctgacccgtgtcgacggcgacggccgtggtggcgccgcgctc
tccatgcgcgccgtcaccggcaagccgatcaagctgatgggtgttggcgaaaagtccgac
gcccttgaggatttccatccctcccgcgttgccgaccgcatcctcggcatgggcgacatc
gtcgccctcgtggagaaggccgccgccaatttcgacgccgatcaggcggcgaagatggcc
aagaagatgcagaagggcgagttcgatctcgacgatctcgccgagcagcttcgccagatg
cagaagctcggcggcatgtccggcatcatgggcctgatgcccggcatggggaagatgaag
aaccagatcgccgcggccggcttcgacgacaagcacatcaagcgccagatcgcgatcgtt
cagtcgatgaccaagaaggagcgcgccaagccggccctcctcgacgccaagcgcaagcgt
cgcgtcgccgccggctccggcaccgacgtctccgacatcaacaagcttctgaagatgcat
cggcagatggccgacatgatgaagaagatgggcaggcagaagggcggcatgctgggcaag
atgctcggcggcctcggcggcggcatgcccaacatgggcgacgtcgatcccgccgttctg
gatcaggtggcccgtgacgccggccttggcggccccgacgccctgaagaacgcgatgaag
ggcatgccgggcggtcttcccaccggccttcccggaatgggcggcatgccccggcttccc
ggccttccgggcctcggaaagggacccaagggcaaatga
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