Hartmannibacter diazotrophicus: HDIA_4325
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Entry
HDIA_4325 CDS
T05217
Name
(GenBank) Superfamily II RNA helicase
KO
K17675
ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:
5.6.2.6
]
Organism
hdi
Hartmannibacter diazotrophicus
Brite
KEGG Orthology (KO) [BR:
hdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
hdi03029
]
HDIA_4325
Enzymes [BR:
hdi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
HDIA_4325
Mitochondrial biogenesis [BR:
hdi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
HDIA_4325
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEXQc_Suv3
Helicase_C
DEAD
PhoH
Motif
Other DBs
NCBI-ProteinID:
SON57866
UniProt:
A0A2C9DC80
LinkDB
All DBs
Position
1:complement(4707407..4710574)
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AA seq
1055 aa
AA seq
DB search
MTKIRDHVSPMTFAPKAPLQAASRARNVTAVLGPTNTGKTHLAIERLLGHDSGAIGLPLR
LLAREVYGRVAARAGVGHVALVTGEEKIVPPGARYWISTVEAMPRDLDLSFIAIDEVQLA
GDFDRGHVFTDRILHMRGRSETMLLGSATARPLIEKLLPGVNIIGRPRMSQLTYTGARKI
TRMPRRSAIVAFSADEVYAIAELIRRQRGGAAVVMGALSPRTRNAQVELFQSGDVEFLVA
TDAIGMGLNLDVDHVAFAQDRKFDGFQYRRLTPSELGQIAGRAGRHLNDGSFGVTGEVSP
LDEDLVRAIESHDFEPLRTFQWRNAALDFSSVDALKRSLDTVPKLEGLTRAPPCSDQDAL
DYALRDPEVCDLARSKDRVALLWDVCQVPDFRKISPAQHGDMIVALYGFLAREGAVPEDW
LQRQLAYADRTDGDIDTLSSRIAHVRTWTYVANRQGWLADQVHWQGVARDMEDRLSDALH
DKLTQRFVDRRTSVLMKRLRENAMLEAEINENGAVHVEGQHVGELHGFRFMPDQSADGPD
GKAVRAAAAKALASEFDKRAERLSRAPNDDIVLASDATLRWLGQPVAKLVAGETPLKPQV
ALLADEHLTGASLDMVRGRLTTWISAHIGTLLKPLIDLAEAADLDGIARGVAFRMVEALG
TLERQEVADDIKALDQTARGAMRKYGVRFGAYHIYLPALLKPAPASLVAQLWALKNGSMD
MPGLAELPALSASGRTSIAVDPSFDKVLYRLVGFRVAGNRAVRLDILERLADIIRPLVAW
KPTDGATPPDGGIAQGGGFTVTVAMTSLLGCAGEDFASILRGLGYKSEQVTVKAMEPKTE
DEAASETEVAADGEAASVETATEAVVAADAEPAPVAEAVGAESVEMAPVAEDAPVAVAEP
GDVAVAVVETTSEEASVAAPVEAAGEEATGAADATAGEPAVEMVEVERAIEVWRPSRFDR
SRRPEGRREGRHNDQQKGHGRKDGQRRNEHHGKGGGQGKPRHDKGGEGKGGESRGGDHPR
HADRPVRRERPVDPDSPFAALAALKADMEGRSRKK
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
ttgaccaagatccgggaccacgtttccccgatgaccttcgccccgaaagcgccgctccag
gcagcaagccgcgcgcggaatgtcactgcggtgctgggaccgaccaacaccggcaagacc
catctcgccatcgagcgcctgctcgggcacgacagcggcgccatcggcctgccgctgcga
ttgctggcgcgcgaggtctatggccgcgtggcggcgcgtgcgggcgttggccatgtcgct
ctcgtcacgggcgaggagaagatcgtaccgcccggcgcgcgctactggatctccaccgtc
gaggcgatgccgcgcgacctcgacctgtcgttcatcgccatcgacgaggtgcagcttgcc
ggcgacttcgaccgcggccacgtcttcaccgaccgtatcctccacatgcgcgggcgcagc
gagaccatgctgctcggctcggcgaccgcccggccgctgatcgaaaagctcctgccgggg
gtcaacatcatcggccggccgcgcatgtcgcagctgacctataccggcgcgcgcaagatc
acccgcatgccgcgccggtcggccatcgttgccttctcggccgacgaggtctacgcgatc
gcggagctgatccgccgccagcgcggcggcgcggcggtggtcatgggtgcgctcagcccg
cgcacccgcaacgcccaggtcgagctcttccagtccggcgacgtggaattcctggtcgcc
accgacgccatcggcatgggcctcaacctcgatgtcgaccatgtcgcctttgcccaggac
cgcaagttcgacggcttccagtatcgccgcctgacgccatcggaactcggccagatcgcc
ggccgcgccggccggcatctcaacgacggcagcttcggcgtcacgggcgaggtcagtccg
ctcgacgaggatctggtgcgggcgatcgagagccacgatttcgagccgctgcgcaccttc
cagtggcgtaacgcggcgctcgacttttcctcggtcgatgcgctgaagcggtcgctcgac
accgtcccgaagctcgaaggactgacgcgggcgccgccctgttccgaccaggatgcgctc
gactatgcgctgcgcgatccggaggtttgcgaccttgcgcgctcgaaggacagggttgcc
ttgctgtgggacgtctgtcaggttccagactttcgcaagatttccccggcgcagcatgga
gatatgattgttgcgctctacggcttccttgctcgcgaaggcgcggttccggaggactgg
ctgcagcgacaattggcctatgccgaccgcaccgatggcgatatagacactctttcgtcg
cgtatcgctcatgtgcggacctggacctatgtcgccaatcggcagggatggcttgccgat
caggtgcactggcaaggggtggcccgcgacatggaggatcggctgtccgatgccctccac
gacaaactgacccagaggttcgtcgaccgccggacctctgtcctgatgaaacgcttgaga
gaaaacgccatgcttgaggccgagatcaacgagaacggcgccgtgcacgtggagggccag
cacgtcggcgaactccatggattccggttcatgcccgatcagagcgccgatggtccggac
ggcaaggcggtgcgcgcggcggcggccaaggcgctcgccagcgaattcgacaagcgggcc
gaacgtctgtcgcgtgcgcccaacgacgacatcgtcctcgcctccgacgcgacgctgcgc
tggctcggccagccggtggccaagctcgtcgccggcgagacgccgctgaagccgcaggtc
gcgctgctggcggacgagcatctcacgggcgcctcgctcgacatggtgcgcggacgcctg
acgacatggatttcggcccatatcggtacgctcttgaagccgctcatcgatcttgccgag
gcggcggatctcgacgggatcgcccgcggtgtcgccttccgcatggtcgaggcgctcggc
acgctggagcggcaggaggttgccgacgacatcaaggcgctggaccagaccgcgcgcggc
gcgatgcgcaaatacggcgtgcgcttcggcgcctaccacatctatctgccggcgttgctg
aagccggcgcccgcaagcctcgtcgcccagctctgggcgctcaagaacggcagcatggac
atgccgggccttgccgaactgccggcgctttcggcctcgggccgcacgtcgatcgcggtc
gatccgagcttcgacaaggtgctctaccggctcgtcggcttccgggtcgcgggcaatcgc
gccgtgcgcctcgatatcctggagcggcttgccgacatcatccgcccgctggtggcctgg
aagccgaccgacggcgcgacgccgccggacggaggcatcgcccagggcggcggcttcacc
gtgaccgtggcgatgacgtcgctgctcggctgcgcgggcgaggatttcgcctcgatcctg
cgcgggctcggctacaagtcggagcaggtgaccgtgaaggcgatggagccgaagacggag
gacgaggctgcttccgagaccgaagtggccgccgacggcgaggcggcaagcgtggagacc
gcgaccgaggccgtcgttgctgccgacgccgagccggcgcctgtcgctgaagcggtcggt
gcggagagcgtggagatggcgccggtggccgaagacgcgcctgtggccgtggccgagccg
ggcgacgttgccgttgcggtcgtggaaacgacgagcgaagaggcttcggtggctgctccg
gttgaagccgcgggtgaggaagcgaccggcgcagcggacgctaccgccggtgagcctgcc
gtcgaaatggtcgaggtggagcgcgcgatcgaggtctggcgtccgtcacgcttcgaccgg
tcccgcaggccggaggggcgccgcgagggacgccacaacgaccagcagaagggccacggc
cgcaaggacggccagcgccggaacgagcatcacggcaagggcggcgggcagggcaagccg
cgtcatgacaagggtggcgagggcaagggcggcgaaagccgtggcggagatcatccgcgc
catgccgaccgcccggtacggcgcgagcgtccggtcgatccggattcgcccttcgccgcg
ctggcggccctgaaagccgacatggaagggcgctcgcgcaagaaatga
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