Hartmannibacter diazotrophicus: HDIA_4453
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Entry
HDIA_4453 CDS
T05217
Symbol
lcfB_3
Name
(GenBank) Long-chain-fatty-acid-CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
hdi
Hartmannibacter diazotrophicus
Pathway
hdi00061
Fatty acid biosynthesis
hdi00071
Fatty acid degradation
hdi01100
Metabolic pathways
hdi01212
Fatty acid metabolism
hdi02024
Quorum sensing
hdi04146
Peroxisome
Module
hdi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
hdi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HDIA_4453 (lcfB_3)
00071 Fatty acid degradation
HDIA_4453 (lcfB_3)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HDIA_4453 (lcfB_3)
09145 Cellular community - prokaryotes
02024 Quorum sensing
HDIA_4453 (lcfB_3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
hdi01004
]
HDIA_4453 (lcfB_3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hdi04147
]
HDIA_4453 (lcfB_3)
Enzymes [BR:
hdi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HDIA_4453 (lcfB_3)
Lipid biosynthesis proteins [BR:
hdi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HDIA_4453 (lcfB_3)
Exosome [BR:
hdi04147
]
Exosomal proteins
Exosomal proteins of breast milk
HDIA_4453 (lcfB_3)
Exosomal proteins of breast cancer cells
HDIA_4453 (lcfB_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
GH3
Motif
Other DBs
NCBI-ProteinID:
SON57994
UniProt:
A0A2C9DCE9
LinkDB
All DBs
Position
1:complement(4837487..4838941)
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AA seq
484 aa
AA seq
DB search
MNLYARLEILAHCQPDKLAIETADRKLTYAELDEVIRRIAGRLRAEGVGRGDVVGLRLRD
TPEHLAALFACLKLGAVGLAIDWRTAKAEFLRILDQFKPKVCFIDGNVRPEFDTVYLKTE
EAEQSEPDTTPYVDVTDEPMMYNLTSGTTGLPKAMVVTHENIYARSMSRSMAGVVLPEDR
YLAALPFAYSAGRDHACNALLVGATLVLFRALYEPMELVEFVNDNNVTAMALSPNVTRSL
TALETKGGPLMPKLRAFTSTTGKLQPEDRAAIRERVAPHLIDYYGSTGTGIMAYINTAED
GATNTAAGRPALGIEVQIVDDDGNVLSGETVGNIRVRGPGIALKAVGSVMSPTEGFRDGW
YYPGDLGHFGTDGLLHLDGRIADLIKRGGLMVYAQEVEQALRRHPAVADAAVVGVPSEKL
GQEVAAFVVRKGDVDAKELVRHCRGEIAPFKVPTIFEFPDDLPRNTNGKVVKAKLLEQFE
KEPS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaacctctatgctcgactggaaattctggcccattgtcagccagacaagcttgccatc
gaaacggccgaccggaaactgacctatgcggaactggacgaggtcattcgccggattgcc
ggccggcttcgggccgagggggttggacgcggcgacgtcgtcggcctgcgtctgcgcgac
acgcctgagcatctggccgcgctctttgcctgcctgaagctcggcgcggtcggtcttgcg
atcgactggcgcacggccaaggcggaattcctgcgcattctcgaccagttcaagccgaag
gtctgcttcatcgacggcaacgtgcggccggagttcgacaccgtctatctgaagacggag
gaagccgagcaatccgagccggacacgacgccctatgtggacgtcaccgacgagccgatg
atgtacaacctgacatcgggcacgaccgggctgccgaaggcgatggtcgtcacgcacgag
aacatctacgcgcgctcgatgagccgctcgatggccggggtggtgctgccggaggaccgg
tatcttgccgccctgccgttcgcctattcggccggccgtgaccatgcctgcaacgcgctg
ctcgtcggcgcgacgctcgtgctgttccgtgcgctctacgagccgatggagctggtcgaa
ttcgtcaacgacaacaacgtgacggcgatggcgctgtcgccgaacgtcacccggtcgctg
acggcgctggagacgaagggcggccccctgatgccgaagcttcgtgcgttcacgtcgacg
acaggcaagctgcagccggaagaccgcgccgccatccgcgaacgggtcgcgccgcatctg
atcgactattacggcagcaccggcaccggcatcatggcctatatcaacacggccgaggac
ggcgcgacgaatacggcagcgggccggcctgcgctcggcatcgaggtgcagatcgtcgat
gacgatggcaatgtcctgtccggcgagacggtcggcaacatccgggtgcgcggtcccggc
atcgccctcaaggctgtcggcagcgtgatgtcgccgacggaaggcttccgcgacggctgg
tattatccgggcgacctcggccacttcggcaccgacgggttgctgcatcttgacggacgc
atcgccgatctgatcaagcgcggcgggctcatggtctacgcccaggaggtggagcaggcg
ctgcgccgccatccggccgtcgccgacgccgcggttgtcggcgtgccgtcggaaaagctc
ggccaggaggtcgccgccttcgtcgtgcgcaagggcgatgtggacgccaaggaactcgtt
cgtcactgccgcggcgaaatcgcgccgttcaaggtgccgacgattttcgagttccccgac
gatctgccgcgcaacaccaacggcaaggtggtcaaggccaagctgctcgaacagttcgaa
aaagagccgagctga
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