Hartmannibacter diazotrophicus: HDIA_4467
Help
Entry
HDIA_4467 CDS
T05217
Symbol
glyA1_2
Name
(GenBank) Serine hydroxymethyltransferase 1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hdi
Hartmannibacter diazotrophicus
Pathway
hdi00260
Glycine, serine and threonine metabolism
hdi00460
Cyanoamino acid metabolism
hdi00630
Glyoxylate and dicarboxylate metabolism
hdi00670
One carbon pool by folate
hdi00680
Methane metabolism
hdi01100
Metabolic pathways
hdi01110
Biosynthesis of secondary metabolites
hdi01120
Microbial metabolism in diverse environments
hdi01200
Carbon metabolism
hdi01230
Biosynthesis of amino acids
hdi01240
Biosynthesis of cofactors
hdi04981
Folate transport and metabolism
Module
hdi_M00140
C1-unit interconversion, prokaryotes
hdi_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
hdi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HDIA_4467 (glyA1_2)
09102 Energy metabolism
00680 Methane metabolism
HDIA_4467 (glyA1_2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HDIA_4467 (glyA1_2)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HDIA_4467 (glyA1_2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HDIA_4467 (glyA1_2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HDIA_4467 (glyA1_2)
Enzymes [BR:
hdi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HDIA_4467 (glyA1_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
SON58008
UniProt:
A0A2C9DD12
LinkDB
All DBs
Position
1:4859227..4860486
Genome browser
AA seq
419 aa
AA seq
DB search
MTTVPDTYFTTGLDADPELGAAIRGELERQRDGIELIASENIVSRLVLETQGSVLTNKTV
EGLPYARYYGGAEFADAIETLAIERATTLFGCRYANVQPHSGSNANAGVFLGLLRLGDTI
LSMNVAAGGHISHGHPATLTGRDYRIVSYGVGRTSERIDLDEIRDLALTNRPRMIIAGGS
AYPRAIDFAALRDIADEAGAYLLVDMAHFAGLVATGLYPNPFPHADVVTTTTYKSLRGAR
GGMVLWNDERLSDRINHGIFPGVQGSVLLHGVAGKAACLGEALQPSFRLYNEAVLANATA
LAESLAETGLRLVAGGTDTGLMLVDLAERGVTGDIASKALEKAGIAVNKNQIPFDPCPPE
APSGLRLSSNAGTARGFDETDFAMVAHWIDTVLRASTDETTLAGVRSEVLALCRAHPIY
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgacaacggttcccgacacctatttcacgaccggtttggacgccgacccggaacttggc
gccgccatccgcggcgaactcgagcgccagcgcgacggcatcgaactgatcgcttcggaa
aacatcgtctcccgcctcgtcctcgagacacagggctcggtgctgaccaacaagaccgtc
gagggcctgccctacgcccgctattacggcggggccgagttcgccgacgccatcgagacg
ctggcgatcgagcgcgcgacgacgctcttcggctgccgctacgccaacgtccagccacac
tcgggctccaacgccaacgccggcgtcttcctcggcctcctgcgactcggcgacacgatc
ctgtccatgaatgtggccgccggcggccacatcagccacggccatccggcaacgctcacc
ggacgcgactatcgcatcgtctcctacggcgtcggccggacctccgagcggatcgacctc
gacgagatccgcgacctcgcgctgaccaaccgtccccggatgattatcgccggcggttcg
gcctatccgcgcgccatcgattttgccgccctgcgcgacatcgccgacgaggccggcgcc
tatctcctcgtcgacatggcccatttcgccggtctcgtggcgacggggctctatccgaac
cccttcccgcatgccgacgtggtgacgaccaccacctacaagtccctgcgcggcgcgcgc
ggcggcatggtgctctggaacgacgagcgtctgtccgaccgcatcaaccacggcatcttc
cccggcgtccagggctccgtcctgctgcacggcgttgccggcaaggccgcctgtctcggc
gaggcgctccagccctccttccgcctctacaacgaggcggtccttgccaatgccacagcc
ctcgccgagagccttgccgagaccggtctgaggctcgttgccggcggcaccgacaccggg
ctcatgctggtcgatctggcggaaaggggcgtgaccggcgacattgcgtcgaaggcgctg
gaaaaggccggcatcgctgtcaacaagaaccagattcccttcgatccatgcccgccggag
gccccctccggcctgcgtctctcttccaacgcgggcaccgcacgcggcttcgacgagacg
gacttcgcgatggtcgcacactggatcgacacggtgttgcgcgcatcgacggacgagacg
acgcttgccggcgtccggtccgaggtcctcgcgctctgccgggcccatccgatctactga
DBGET
integrated database retrieval system
