Hartmannibacter diazotrophicus: HDIA_4677
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Entry
HDIA_4677 CDS
T05217
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hdi
Hartmannibacter diazotrophicus
Brite
KEGG Orthology (KO) [BR:
hdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hdi03016
]
HDIA_4677 (truB)
Enzymes [BR:
hdi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HDIA_4677 (truB)
Transfer RNA biogenesis [BR:
hdi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HDIA_4677 (truB)
Prokaryotic type
HDIA_4677 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
DUF6308
Motif
Other DBs
NCBI-ProteinID:
SON58218
UniProt:
A0A2C9DDP0
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All DBs
Position
1:5098801..5099730
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AA seq
309 aa
AA seq
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MARKQKKNDVHGWVVLDKPFGMTSTQAVGAVKRLVGTSKAGHAGTLDPLASGMLPIALGE
ATKTVPFVMDGEKVYRFTVRWGAETTTDDAEGEVVATAESRPTADEINTILDDFEGVIMQ
VPPAFSAIKVDGERAYDLARAGEEVELAARPIEIHALDLVECPDADTAVFEAECGKGTYV
RALARDMGRQLGCRGHVVELRRLVVGPFDEDDMISLEMLEALRHSPAREDDLAKLIRPIE
TALDDIPALALSEADANRLKNGQPVLLRGRDAPTFEGPAYAACRGQLVALGDIERGEFHP
KRVFNLTRS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaaaacagaagaaaaacgacgtgcacggctgggtcgtgctcgacaagcctttt
ggcatgacctcgacgcaggccgtcggcgccgtgaagcgcctcgtaggcacgtcgaaggcc
ggccatgccggaacgctcgatccgctcgcctcgggcatgctgccgatcgcgctcggagag
gcgaccaagaccgtgcccttcgtcatggacggcgagaaggtctaccgcttcacggtgcgc
tggggcgccgagacgacgacggacgatgccgagggcgaggtggttgcgaccgccgaaagt
cggccgaccgccgacgagatcaacaccatcctcgacgacttcgagggcgtcatcatgcag
gtgccgccggccttctcggcgatcaaggtcgacggcgagcgcgcctacgaccttgcccgc
gccggcgaggaggtggagcttgccgcccggccgatcgaaatccatgcgctcgatctcgtc
gagtgcccggatgccgatacggccgtcttcgaggccgaatgcggcaagggcacctatgtc
cgcgcgctggcgcgggacatgggccgccagctcggctgccgcggccacgtcgtcgaattg
cgccggctcgtcgtcggcccgtttgacgaagacgacatgatttcactggaaatgctggaa
gccttgcggcatagtcccgcgcgcgaggacgaccttgcaaaactgatccgccccatcgag
accgcgctggacgacatcccggcgctggccctgagcgaagcggacgcgaaccggctgaaa
aacggtcagccggttctcctgcgcggacgggatgctcctacgttcgaaggaccggcttac
gccgcctgccgaggccagctcgtggccctcggggacatcgaacgtggtgagtttcacccc
aagcgcgtgttcaacctgacgcgaagctga
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