Hartmannibacter diazotrophicus: HDIA_4751
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Entry
HDIA_4751 CDS
T05217
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
hdi
Hartmannibacter diazotrophicus
Pathway
hdi03030
DNA replication
hdi03410
Base excision repair
hdi03420
Nucleotide excision repair
hdi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HDIA_4751 (polA)
03410 Base excision repair
HDIA_4751 (polA)
03420 Nucleotide excision repair
HDIA_4751 (polA)
03440 Homologous recombination
HDIA_4751 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hdi03032
]
HDIA_4751 (polA)
03400 DNA repair and recombination proteins [BR:
hdi03400
]
HDIA_4751 (polA)
Enzymes [BR:
hdi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HDIA_4751 (polA)
DNA replication proteins [BR:
hdi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HDIA_4751 (polA)
DNA repair and recombination proteins [BR:
hdi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HDIA_4751 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HDIA_4751 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Taq-exonuc
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
SON58292
UniProt:
A0A2C9DD74
LinkDB
All DBs
Position
1:5195636..5198638
Genome browser
AA seq
1000 aa
AA seq
DB search
MSDQAASDTAPHHRPVRSGDHVFLVDGSGYIFRAYHALPPLTRKSDGLPIGAVAGFCNML
WKLLREADDTAAGVKPTHLAVILDASGETFRSEIFPAYKAQRPPPPADLVPQFGLIREAV
RAFNVACVEKTGFEADDLIATYARQAREAGADVTIVSSDKDLMQLVGPGVILLDTMKDRR
LGPDEVVEKFGVPPEKVVDVQSLAGDSVDNVPGVPGIGIKTAAQLILEYGDLEGLLAQAD
GIKQKKRRENLIEFAEQARISRKLVELDQNTPLDEPIDALAVRGLKGEQLIAFLKAMEFN
SLTRRVSEATSTDVAGVEPASVPIKGWPPEADPSAEAEKPAESTEKAGDSAPKADAVSAR
LPADVEPNTPAAVVAERQAAAVAAPVDTSAYETVRSLDRLDAWIAAAFDLGYVAVDTETT
SLDAMQAELVGVSLSTGPGKACYIPLLHQTGTNDLLGGGLAPDQISQAEAIKRLKPLLEA
PTVLKIAHNLKYDYLILARHGIHVAPFDDTMLLSYALDAGKGGQGMDELSERWLGHKPIP
FKEVAGSGKSMLTFDQVPIDKASVYAAEDADVTFRLWRVLKPRLPADRVTTVYETLERPL
LPVLARMEMRGISVDRQILSRLSGDFAQTMAALEAEIHELAGEKFNVGSPKQLGDILFGQ
MGLPGGKKTKTGAWATGADVLEDLAAQGHELPRRLLDWRQLSKLKSTYTDALPGFIHPET
KRVHTSYSLAATTTGRLSSSDPNLQNIPVRTEEGRKIRTAFVAAPGHKLISADYSQIELR
ILAHVAEIPQLVQAFEDGIDIHAMTASEMFGVPVEGMDPMVRRRAKAINFGIIYGISAFG
LSNQLSISRSEASDYIKRYFERFPGIRDYMEATKAYCREHGYVVTIFGRKAHYPEIGSSN
PSMRAFMERAAINAPIQGSAADVIRRAMVRMEAALDAANVRADMLLQVHDELIFEVADDA
VEAALPVISKVMEEAAEPAVRLRVPLKVDARAAQNWDEAH
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatcaagccgcctccgacaccgccccgcatcaccgtcccgttcgctccggcgat
cacgtcttcttggtggacgggtcgggctatatcttccgcgcctatcacgcgctgccgccc
ctgacgcgaaagtccgacgggcttccgatcggggccgtcgccggcttctgcaacatgctc
tggaagctcttgcgcgaggcggacgatacggcggccggcgtcaagccgacccatctggcc
gttatcctcgacgcctccggcgagaccttccgcagcgagatctttcccgcctacaaggcc
cagcgtccgccgccgcccgccgatctcgtgccgcagttcgggctgatccgcgaggccgtc
cgtgccttcaacgtcgcctgcgtggaaaagaccggcttcgaggccgacgacctgatcgcc
acctacgcccgccaggcccgcgaggccggcgcggacgtcaccatcgtctcctccgacaag
gatctgatgcagctggtcggtcccggcgtcatccttctcgacacgatgaaggaccgccgt
ctcggtccggacgaggtggtggagaaattcggcgtgccgccggaaaaggtcgtcgacgtc
cagtcgctcgccggcgacagcgtcgacaacgtgcccggcgtgccgggcatcggcatcaag
accgcggcccagctcatcctggaatacggcgatctggaaggactgctagcgcaggccgac
ggcatcaagcagaagaagcgccgcgaaaacctcatcgaattcgccgaacaggcgcgcatt
tcccgcaagctcgtcgagcttgaccagaacacgccgctcgacgaaccgatcgatgcgttg
gccgtgcgcggcctcaagggcgagcagctcatcgccttcctgaaggcgatggagttcaac
tcgctgacccgccgtgtgagcgaggcgacctcgaccgacgtggccggcgtcgagcccgcg
agcgtgccgatcaagggctggccgcccgaggccgatccgtcggcggaggcggaaaagccg
gccgaaagcaccgagaaggcgggcgacagcgcgccgaaagccgatgccgtcagcgccagg
ttgccagcggacgtcgagccgaacacgcccgccgccgtggtggccgagcgtcaggccgcc
gctgtcgccgcgcccgtcgacaccagcgcctacgagacggtccgcagcctcgaccggctg
gatgcctggatcgcggcggccttcgacctcggctatgtcgcggtcgataccgagacgacg
tcgctcgacgccatgcaagccgaacttgtcggcgtgtcgctcagcacggggcccggcaag
gcctgctatatcccgctgcttcaccagaccggcacgaacgatcttctcggcggcgggctc
gcgccggaccagatttcgcaggccgaggcgatcaagcgcctgaagccgctgcttgaggcg
ccgaccgtcctcaagatcgcgcacaatctcaaatacgactatctcatcctcgctcgtcac
ggcattcacgtcgcgcccttcgacgacaccatgctgctgtcctatgcgctcgatgccggc
aagggcgggcagggcatggacgagctgtccgagcgctggctcggccacaagccgatcccc
ttcaaggaggtcgccggctccggcaagtcgatgctgaccttcgatcaggtgccgatcgac
aaggcgagcgtctacgccgccgaggatgcggacgtcaccttccggctctggcgcgtcctg
aagccgcgtcttcccgccgatcgcgtcaccaccgtctacgagacgctggaacgtccgctg
ttgccggttctggcgcgcatggagatgcgcggcatttccgtcgaccggcagattctctcg
cgtctttccggggatttcgcccagaccatggcggcgctggaagccgagattcacgagctt
gccggcgagaagttcaacgtcggctcgcccaagcagctgggtgatatcctcttcggccag
atgggccttcccggcggcaagaagaccaagaccggcgcctgggcgacgggggccgacgtt
ctggaggatctggcggctcagggccacgagttgccccgtcgcctgctcgactggcgtcag
ctatcgaagctgaagtcgacctatacggacgctctgcccggcttcatccacccggagacg
aagcgcgtccacacgtcctattcgctggccgcgacgacgaccgggcggctctcctcctcc
gatccgaacctgcagaatattccggtccgcacggaagaggggcgcaagatccgcaccgcc
ttcgtcgctgcgccgggacacaagctgatctcggccgactacagccagatcgagctacgc
attctcgcccacgtcgccgagatcccgcagctcgtccaggccttcgaggacggcatcgac
attcacgccatgaccgcctccgaaatgttcggcgtgcccgtggaaggcatggacccgatg
gtccgccgccgggccaaggcgatcaacttcggcatcatctacggcatttccgccttcggc
ctctccaaccagctatcgatctcccgctccgaggcctcggactatatcaagcgctacttc
gagcgcttccccggcatccgcgactacatggaggcgaccaaggcctattgccgcgagcac
ggctatgtcgtcaccatcttcggccgcaaggcgcactatccggagatcggctcatccaat
ccgtcgatgcgcgccttcatggagcgggcggccatcaacgcgccgatacagggctcggcc
gccgacgtgatccgccgcgcgatggtccgcatggaagcggcgctggacgccgccaacgtc
cgggccgacatgctgctgcaggtccatgacgaactgatcttcgaggttgccgacgacgcg
gtcgaggcggcgcttcccgtgatctcgaaggtgatggaggaggcggccgagcctgccgtg
cgcctcagagtgccgctcaaggtcgacgcccgcgcggcgcagaattgggacgaggcgcat
tga
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