Halobacterium sp. DL1: HALDL1_00845
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Entry
HALDL1_00845 CDS
T03878
Name
(GenBank) transcription factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
hdl
Halobacterium sp. DL1
Pathway
hdl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hdl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HALDL1_00845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hdl03021
]
HALDL1_00845
Transcription machinery [BR:
hdl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HALDL1_00845
Prokaryotic type
Archaeal type
TFB
HALDL1_00845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
DZR_2
FYVE
Motif
Other DBs
NCBI-ProteinID:
AHG05576
LinkDB
All DBs
Position
unnamed:complement(182011..183090)
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AA seq
359 aa
AA seq
DB search
MSSNYASEKTVSDVQTTTTEQRSRKTTVEREPSGRSACPECEGQVITADEESFCRDCGLV
VADEWVDLSPTLNDLGLIGNADQSIETVDPLRTDNGLHTKIGKSTDGHGNPLSNEQWKKF
QRLRKWHRRYQFGEKRKRTKRLNEGLRDIEMIGGNLDLPDYVIKMAARYLRSASEARLPG
GRMAWEALAGGAVLVAARASPINRDEIDVAVAMYTKAPHERVCAAARKIRCECGFDAPLI
RPNAVMEVVDALDNDAIPGARVVRTWRLAQHLMRLGDQVPVGPGTPRLTVAASALYAADR
LLPSKHLTQGQVAEASSTVVPTSQNRIARYSRELVNAYKDEHGTDNPGVGLEEERNTLR
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtaactacgcgagcgaaaagacggtttcggatgtacagactacaactactgag
cagcgtagtcgaaagactacagttgagcgcgagccgtcgggacggtcggcctgtcccgag
tgtgagggccaggtgattactgcagacgaggagtcgttctgcagggattgcgggttggtt
gtcgccgacgagtgggtcgacctgagcccgacgctgaacgatctgggcctgattgggaac
gccgatcagagcatcgagacggtggacccactgcggacggacaatggccttcacacgaag
attgggaagtcgactgacggccacggtaatcccctgagcaatgagcagtggaagaagttc
cagcgtctccggaagtggcacaggcgctatcagttcggcgagaagcgcaagcggacgaag
cgcctcaacgaggggcttcgggacatcgagatgatcggtggcaatctggacctgccggac
tacgtcatcaagatggcggcgagatacctccggagcgcttcggaagcgcggcttccgggc
gggcggatggcctgggaagcactcgctggcggcgccgtcctagtcgcggcacgagcgtct
cccatcaatcgcgacgagatcgatgtcgcggtcgcgatgtacacgaaagcgccccacgag
cgggtgtgtgctgcagcgcggaagattcggtgtgaatgtgggttcgatgcaccactcatc
aggccgaatgccgtgatggaggtcgtcgacgcgctcgataatgacgcgatccccggggcg
cgcgtcgtgcggacgtggcggctggcccaacacctgatgagacttggcgatcaggtgccg
gtcgggccggggacgccacggctgaccgtcgcggcgtcggcgctgtacgcggcggatcgc
ctgctcccgagcaagcatctcacccaggggcaggtcgccgaggcgtcaagcacagtcgtg
ccgacgtcccaaaatcggatcgcgaggtacagtcgtgaactcgtcaacgcctacaaggac
gaacacggcaccgataacccgggtgtcggcctcgaggaagagcgaaacaccctgcgctga
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integrated database retrieval system
