Halobacterium sp. DL1: HALDL1_02010
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Entry
HALDL1_02010 CDS
T03878
Symbol
rfc
Name
(GenBank) ATPase AAA
KO
K04801
replication factor C small subunit
Organism
hdl
Halobacterium sp. DL1
Pathway
hdl03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
hdl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HALDL1_02010 (rfc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hdl03032
]
HALDL1_02010 (rfc)
DNA replication proteins [BR:
hdl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
RFC (replication factor C)
HALDL1_02010 (rfc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RuvB_N
AAA_assoc_2
AAA_16
AAA_14
AAA_22
TIP49
DNA_pol3_delta
ResIII
Mg_chelatase
AAA_24
AAA_7
AAA_25
AAA_5
PhoH
AAA_2
AAA_18
AAA_3
DUF3400
Viral_helicase1
SLFN-g3_helicase
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AHG02542
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Position
complement(95004..95975)
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AA seq
323 aa
AA seq
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MADAAGGRQEIWVEKYRPERLEDVVGHPDITERLQSYVDRDDLPHLLFAGPAGTGKTASA
VSIAKEIYGDDWQENFLELNASDQRGIDVVRDRIKNFARASFGGYDYRVIFLDEADALTD
DAQSALRRTMEQFSNNTRFILSCNYSSKIIDPIQSRCAVFRFSQIDDDAVAAHLRDIAGR
EDLEYTEAGIDALVYAADGDMRRAINALQAASATGDAVDEEVVYAITATARPEEIEGMVT
EALDGDFTAARSTLDDLLTNRGLAGGDIIDQIHRSVWSFDVEEEAAVRLLDRLGEADFRI
AEGANERVQLEALLASVALRAQD
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgccgccggcggacggcaggaaatctgggtcgagaagtaccggccggagcga
ctcgaggacgtcgtcggccaccccgacatcacggagcgcctccagagctacgtcgaccgg
gacgacctcccgcacctgctgttcgcgggccccgccggcaccgggaagaccgcatccgcc
gtctctatcgccaaggagatatacggcgacgactggcaggagaacttcctcgagttgaac
gccagcgaccagcgcggcatcgacgtggtccgggaccgcatcaagaacttcgcgcgggcc
tccttcggcggctacgactaccgcgtcatcttcctcgacgaggccgacgcgctcaccgac
gacgcccagtccgcgctccgccgcacgatggagcagttctcgaacaacacgcggttcatc
ctctcctgcaactactcctcgaagatcatcgaccccatccagtcccgctgtgccgtcttc
cggttctcccagatcgacgacgacgcggtcgccgcccacctccgggacatcgcgggccgc
gaggacctggagtacacggaggccggcatcgacgcgctcgtctacgccgccgacggcgac
atgcgccgcgccatcaacgccctgcaggcggcctccgcgaccggcgacgccgtcgacgag
gaggtcgtctacgccatcaccgcgaccgcccgccccgaggagatcgaggggatggtgacc
gaggcgctggacggcgacttcacggccgctcgctcgacgctcgacgacctgctgacgaac
cgcggcctcgcgggcggcgacatcatcgaccagatccaccgctcggtctggtcgttcgat
gtcgaggaggaggccgcggtccgcctgctcgaccgcctcggcgaggccgacttccgcatc
gcggagggcgccaacgagcgcgtccagctagaggcactgctggcgtcggtcgcgctccga
gcgcaggactga
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