KEGG   Halobacterium sp. DL1: HALDL1_02010
Entry
HALDL1_02010      CDS       T03878                                 
Symbol
rfc
Name
(GenBank) ATPase AAA
  KO
K04801  replication factor C small subunit
Organism
hdl  Halobacterium sp. DL1
Pathway
hdl03030  DNA replication
Brite
KEGG Orthology (KO) [BR:hdl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HALDL1_02010 (rfc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hdl03032]
    HALDL1_02010 (rfc)
DNA replication proteins [BR:hdl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     HALDL1_02010 (rfc)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RuvB_N AAA_assoc_2 AAA_16 AAA_14 AAA_22 TIP49 DNA_pol3_delta ResIII Mg_chelatase AAA_24 AAA_7 AAA_25 AAA_5 PhoH AAA_2 AAA_18 AAA_3 DUF3400 Viral_helicase1 SLFN-g3_helicase nSTAND3
Other DBs
NCBI-ProteinID: AHG02542
LinkDB
Position
complement(95004..95975)
AA seq 323 aa
MADAAGGRQEIWVEKYRPERLEDVVGHPDITERLQSYVDRDDLPHLLFAGPAGTGKTASA
VSIAKEIYGDDWQENFLELNASDQRGIDVVRDRIKNFARASFGGYDYRVIFLDEADALTD
DAQSALRRTMEQFSNNTRFILSCNYSSKIIDPIQSRCAVFRFSQIDDDAVAAHLRDIAGR
EDLEYTEAGIDALVYAADGDMRRAINALQAASATGDAVDEEVVYAITATARPEEIEGMVT
EALDGDFTAARSTLDDLLTNRGLAGGDIIDQIHRSVWSFDVEEEAAVRLLDRLGEADFRI
AEGANERVQLEALLASVALRAQD
NT seq 972 nt   +upstreamnt  +downstreamnt
atggcagacgccgccggcggacggcaggaaatctgggtcgagaagtaccggccggagcga
ctcgaggacgtcgtcggccaccccgacatcacggagcgcctccagagctacgtcgaccgg
gacgacctcccgcacctgctgttcgcgggccccgccggcaccgggaagaccgcatccgcc
gtctctatcgccaaggagatatacggcgacgactggcaggagaacttcctcgagttgaac
gccagcgaccagcgcggcatcgacgtggtccgggaccgcatcaagaacttcgcgcgggcc
tccttcggcggctacgactaccgcgtcatcttcctcgacgaggccgacgcgctcaccgac
gacgcccagtccgcgctccgccgcacgatggagcagttctcgaacaacacgcggttcatc
ctctcctgcaactactcctcgaagatcatcgaccccatccagtcccgctgtgccgtcttc
cggttctcccagatcgacgacgacgcggtcgccgcccacctccgggacatcgcgggccgc
gaggacctggagtacacggaggccggcatcgacgcgctcgtctacgccgccgacggcgac
atgcgccgcgccatcaacgccctgcaggcggcctccgcgaccggcgacgccgtcgacgag
gaggtcgtctacgccatcaccgcgaccgcccgccccgaggagatcgaggggatggtgacc
gaggcgctggacggcgacttcacggccgctcgctcgacgctcgacgacctgctgacgaac
cgcggcctcgcgggcggcgacatcatcgaccagatccaccgctcggtctggtcgttcgat
gtcgaggaggaggccgcggtccgcctgctcgaccgcctcggcgaggccgacttccgcatc
gcggagggcgccaacgagcgcgtccagctagaggcactgctggcgtcggtcgcgctccga
gcgcaggactga

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