Halobacterium sp. DL1: HALDL1_02440
Help
Entry
HALDL1_02440 CDS
T03878
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hdl
Halobacterium sp. DL1
Brite
KEGG Orthology (KO) [BR:
hdl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hdl03032
]
HALDL1_02440
03400 DNA repair and recombination proteins [BR:
hdl03400
]
HALDL1_02440
Enzymes [BR:
hdl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HALDL1_02440
DNA replication proteins [BR:
hdl03032
]
Prokaryotic type
DNA Topoisomerases
HALDL1_02440
DNA repair and recombination proteins [BR:
hdl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HALDL1_02440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NucS_N
Auto_anti-p27
HypA
DUF7564
DmmA-like_C
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AHG02611
LinkDB
All DBs
Position
180075..180809
Genome browser
AA seq
244 aa
AA seq
DB search
MQDAIRVLAGECAVRYEVGGETERNLRGDVVVIVKPDDTVLVHDADGYQPAAWLTRPGVV
RYTRDARGFRLDAADGDERLVVESATEHGDAHYPASPAGPPVGSCECEGTLVRDGGRVVC
VDCRADYPIPRDAAVTGETCPDCGLPLLRVARGVEVTACLDRDCRPIAAAVREVVDGEWT
CRCGEPLGIETNRGLHAVCEDCGERHRLPRGSADGACDCGLPAFDTGDGSRCLDAECTAA
LQSA
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacgccatccgcgtgctcgcaggcgagtgtgccgtgcgctacgaagtgggcggc
gagacggaacgcaacctccgcggcgacgtggtcgtcatcgtgaaacccgacgacaccgtc
ctcgtccacgacgccgacggctaccagccggcggcctggctcactcgcccgggcgtcgtc
cgctacacccgcgacgcccgcgggttccgcctcgacgccgccgacggcgacgagcgcctc
gtcgtcgagagcgcgaccgaacacggcgacgcccactaccccgcctcgcccgccggcccg
cccgtcgggtcctgtgagtgcgagggcacgctcgtccgggacggcggccgcgtggtctgc
gtggactgccgcgcggactaccccatcccccgggacgccgccgtcaccggcgagacctgt
ccggactgcgggctccccctgctgcgcgtggcccgcggcgtcgaggtgacggcctgtctc
gaccgggactgccgtcccatcgcggccgcggtcagggaggtcgtcgacggcgagtggacc
tgccgctgcggcgagccactcggtatcgagacgaaccgcggcctccacgccgtctgcgag
gactgcggcgagcgccaccgcctcccgcggggcagcgcagacggggcgtgtgattgtggc
ctccccgcgttcgacaccggcgacggctcgcggtgtctcgacgccgagtgcacggcggcg
ctgcagtcggcgtga
DBGET
integrated database retrieval system
