Halobacterium sp. DL1: HALDL1_04920
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Entry
HALDL1_04920 CDS
T03878
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
hdl
Halobacterium sp. DL1
Pathway
hdl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hdl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HALDL1_04920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hdl03400
]
HALDL1_04920
DNA repair and recombination proteins [BR:
hdl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HALDL1_04920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
nSTAND_NTPase5
AAA_29
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AHG03008
LinkDB
All DBs
Position
complement(679938..682529)
Genome browser
AA seq
863 aa
AA seq
DB search
MDAALGPPDQMAESEGDLTPMMSQYFELTRRYEDALVLFQVGDFYELFCDAAEAAARICE
ITLTAREDSTGRYPMAGVPIDNAEPYIDDLLDAGYRVAVADQVEDPEEVTGVVDRAVTRI
VTPGTLTEDELLAGDDNNFVAALSQSESGRFGLALLDVSTGDFYATSLPEAARVRDELGR
FAPAELVAGPAVDAGRFDGDTFLAEYDDAAFDLDAATERVASYFGSADALAADAEVRACG
ALLAYAEYTRGGEGHQRLDYLNHLTRYDPREYLQLDAVALRSLEVFEQRSVHGAEGTALV
DVLDETACALGRRALTDWLRRPLTDREAIEARHDAVGELVADPMTREELHEHLRDVYDIE
RLVSRVSRGRANARDLRSLKATLDVVPEVRSLLADADCGKLRELRAELDDLPEIRNLLDR
AIVPDPPQELTEGGVVRDGYDETLDGLRETERSGKQWIDDLEAEERERTGVDSLKVGHNA
VHGYYIEVTHANSEAVPEQYQRRQTLKNAERYVTPELKEREDDIVRAEQRAQDLEYELFT
EVRDRVAREAERMQAVAAALAALDALASFASVAAAHDYARPTMGGDGIRVEGGRHPVVER
TESGFVPNDSRLTPDERVAVVTGPNMSGKSTYMRQVALVVLLAQAGSFVPAANARLRLVD
RIFTRVGASDDIAGGRSTFMVEMTELASILRAATEDSLVLLDEVGRGTSTTDGLAIARAV
TEYVHDELGATTLFATHHHELTADAERLADAVNLHFGATRTDEGVTFQHEVREGAATASY
GVEVARTAGVPDEVVERARTFLDESVVAADAGERTRDGSADEGADESTGTDAGLAAKLRD
VNVAELTPIEALNVLNELRRDLE
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggcgctggggccacccgaccagatggccgagagcgagggcgacctcacgccg
atgatgagccagtacttcgagctcacgcggcgctacgaggacgcgctcgtactctttcag
gtgggcgacttctacgaactgttctgcgacgccgccgaggcggccgcccgcatctgcgag
atcacgctgactgctcgcgaggactcgacgggccgctacccgatggcgggcgtccccatc
gacaacgccgaaccgtacatcgacgacctgctcgacgcgggctaccgggtcgccgtcgcc
gaccaggtagaggaccccgaggaggtgactggcgtcgtcgatcgggccgtcacacgcatc
gtgaccccggggacgctcacggaggacgaactgctcgcgggcgacgacaacaacttcgtc
gcggcgctgtcccagtccgagagcggccgcttcggcctcgcgctgctcgacgtctcaacg
ggcgacttctacgccacgagtctccccgaggcggccagggtgcgtgacgaactggggcgg
ttcgcgcccgccgagctcgtcgccggtccggccgtcgacgcgggccgcttcgacggcgac
accttcctcgcggagtacgacgacgcggcgttcgacctcgacgcggccacggaacgcgtg
gcgtcgtacttcgggagcgcggacgccctcgccgccgacgcggaggtgcgggcctgcggc
gcgctgctcgcgtacgccgagtacacgcgcgggggcgaggggcaccagcgactcgactac
ctcaaccacctcacgcgctacgacccccgggagtacctccagctggatgccgtggcgctg
cgcagcctcgaggtgttcgaacagcgcagcgtccacggcgccgagggcaccgcgctcgtg
gacgtactcgacgagaccgcctgtgcgctcgggcggcgcgcgctgaccgactggctccgc
cgcccgctcaccgaccgcgaggccatcgaggcgcgccacgacgccgtcggtgaactcgtc
gccgacccgatgacccgcgaggaactccacgaacacctccgggacgtctacgacatcgag
cgcctcgtctcgcgggtgtcccggggccgggcgaacgcccgcgacctgcgctcgctgaag
gccaccctcgacgtggtgccggaggtgcgctcgctgctcgcggacgccgactgcgggaaa
ctccgggagttgcgcgccgaactcgacgatctgccggagattcggaacctgctcgaccgc
gccatcgtgccggacccgccacaggaactcaccgagggcggggtcgtccgggacggctac
gacgagaccctcgacggcctccgggagacagagcgctcgggcaagcagtggatcgacgac
ctggaggccgaggagcgcgagcgcacgggcgtggattcgctgaaggtcgggcacaacgcg
gtccacggctactacatcgaggtgacgcacgcgaacagcgaggcggtgcccgagcagtac
cagcgccgacagaccctgaagaacgccgagcgctacgtcacgccggagttgaaggaacgc
gaggacgacatcgtgcgcgccgagcaacgcgcccaggacctcgagtacgagctgttcacc
gaggtccgtgacagggtcgcccgcgaggccgagcggatgcaggcggtggcggcggcgctc
gcagcgctggacgccctcgcatccttcgcgtcggtcgccgcggcccacgactacgcgcgc
cccacgatgggcggcgacggcatccgcgtcgagggcgggcgccaccccgtcgtcgagcgg
acggagtcgggcttcgtgcccaacgacagccgactcacgcccgacgagcgcgtcgcggtg
gtcacggggccgaatatgagcgggaagtcgacgtacatgcgccaggtcgcgcttgtcgtc
ctgctggcgcaggccggcagtttcgtgcccgccgccaacgcccgactccggctcgtcgac
cgcatcttcacgcgggtcggcgcgagcgacgacatcgctggcgggcgctcgacgttcatg
gtcgagatgacggagctcgcgtccatcctccgggcggccacggaggactcactcgtgctg
ctcgacgaggtgggccgcggcacgtcgacgacggacggtctcgccatcgcgcgcgccgtc
acggagtacgtccacgacgaactcggcgcgacgacgctgttcgccacccaccaccacgaa
ctcaccgcggacgccgagcgcctcgccgacgccgtcaacctccacttcggggcgacgcgc
accgacgagggcgtgaccttccagcacgaggtccgggagggcgcggcgaccgcctcctac
ggcgtcgaagtcgcgcggaccgcgggggtccccgacgaggtggtcgagcgcgcccgcacg
ttcctcgacgagtccgtcgtcgcggcggacgctggcgaacggacacgcgacgggagcgcg
gacgagggagcggacgagagcaccggcacggacgccggcctggcggcgaaactccgggac
gtgaacgtcgcggaactgacgccgatcgaggcgctgaacgtgctcaacgagctccggcgc
gacctggagtag
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