Halobacterium sp. DL1: HALDL1_05750
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Entry
HALDL1_05750 CDS
T03878
Name
(GenBank) transcription initiation factor IIB 2
KO
K03124
transcription initiation factor TFIIB
Organism
hdl
Halobacterium sp. DL1
Pathway
hdl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hdl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HALDL1_05750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hdl03021
]
HALDL1_05750
Transcription machinery [BR:
hdl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HALDL1_05750
Prokaryotic type
Archaeal type
TFB
HALDL1_05750
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Cas12f1-like_TNB
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AHG03147
LinkDB
All DBs
Position
complement(832579..833532)
Genome browser
AA seq
317 aa
AA seq
DB search
MTDTRMRSRERERTDETETTDGCPECDGLVVQDEEHGESVCADCGLVVEEDGIDRGPEWR
AFDSKEKDQKSRVGAPTTNTMHDKGLSTNIDWRDKDAYGNSLSSNQRQKMQRLRKWNERF
RTRDAKERNLKQALGEIDRMASAQGLPDSVRETASVIYRRALEEDLLPGRSIEGVATSCV
YAAARQAGVPRSLDEIADVSRVEKAEIARTYRYVIRELGLEVAPADPESYVPRFASSLEL
SDEASHRARELLKTAKDKGVHSGKSPVGLAAAAVYAAALLTNEKTTQAKVSEVADISEVT
IRNRYHELLEAEETIPV
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgacagacacacgcatgcgttccagagagcgggagcgcacagacgagacggagacgacg
gacggctgcccagagtgcgacgggctggtcgtccaggacgaggagcacggcgagtcggta
tgcgcagactgcggcctcgtggtcgaggaggacggcatcgaccgcggaccggagtggcgc
gcgttcgactccaaggagaaagaccagaagtcccgcgtcggcgccccgacgacgaacacg
atgcacgacaagggactctcgacgaacatcgactggcgggacaaggacgcctacggcaac
tcgctgtcctccaatcagcgccagaagatgcagcgcctccgcaagtggaacgagcgcttc
cgcacccgcgacgccaaggagcgcaacctcaagcaggccctcggcgagatagaccgcatg
gcgtccgcacagggcctgccggacagcgttcgcgagacggcgtcggtcatctaccgccgc
gcgctcgaggaggacctgctgccggggcgctccatcgagggcgtcgccacctcctgcgtc
tacgccgccgcgcgccaggccggcgttccgcgcagcctcgacgagatcgccgacgtgagc
cgcgtcgagaaggccgagattgcccgcacctaccgctacgtcatccgcgaactcggcctc
gaggtcgcgcccgcggaccccgagagctacgtgccgcggttcgcctcctcgctggaactc
tccgacgaggcctcccaccgcgcccgcgaactgctgaagacggccaaggacaagggcgtc
cactccgggaagtcaccggtcggcctcgccgcggccgccgtctacgccgccgcgctgctc
accaacgagaagacgacgcaggcgaaggtctcggaggtcgctgacatctccgaggtcacc
atccgcaaccgctaccacgaactcctcgaggccgaggagacgattccggtctag
DBGET
integrated database retrieval system
