KEGG   Halobacterium sp. DL1: HALDL1_06020
Entry
HALDL1_06020      CDS       T03878                                 
Symbol
nusG
Name
(GenBank) transcription antitermination protein NusG
  KO
K15172  transcription elongation factor SPT5
Organism
hdl  Halobacterium sp. DL1
Pathway
hdl03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:hdl00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    HALDL1_06020 (nusG)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hdl03021]
    HALDL1_06020 (nusG)
   03019 Messenger RNA biogenesis [BR:hdl03019]
    HALDL1_06020 (nusG)
Transcription machinery [BR:hdl03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     HALDL1_06020 (nusG)
  RNA polymerase I system
     HALDL1_06020 (nusG)
Messenger RNA biogenesis [BR:hdl03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     HALDL1_06020 (nusG)
SSDB
Motif
Pfam: Spt5-NGN KOW KOW4_SPT5 DUF6093
Other DBs
NCBI-ProteinID: AHG03196
LinkDB
Position
complement(885053..885490)
AA seq 145 aa
MPVFAVKTTASQEQTVASMIANREEDDIHAVLAPDALTSYVMVEADDSSIIQRVMDEIPH
ARSLVPGKSSITEVEHFLSPKPDVEGIAENDIVELIAGPFKGEKAQVQRIDEGKDQVTVE
LYEATVPIPVTVRGDQIRVLDSDER
NT seq 438 nt   +upstreamnt  +downstreamnt
atgccggtgttcgccgtcaagacgaccgcgagccaggagcagaccgtcgcgagcatgatt
gccaaccgcgaggaggacgacatccacgcagtgctggcgccggacgcgctcacgagctac
gtgatggtcgaggccgacgactccagcatcatccagcgcgtgatggacgagattccccac
gcccgcagcctggtcccggggaagtcctccatcacggaggtcgagcacttcctctccccg
aagccggacgtcgagggcatcgcggagaacgacatcgtcgaactcatcgccggcccgttc
aagggcgagaaggcccaggtccagcgcatcgacgagggcaaggaccaggtcaccgtcgaa
ctgtacgaggcgaccgtcccgattccggtgacggtgcgcggcgaccagatccgcgtgctg
gactccgacgaacggtag

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