Halobacterium sp. DL1: HALDL1_08400
Help
Entry
HALDL1_08400 CDS
T03878
Name
(GenBank) cystathionine beta-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
hdl
Halobacterium sp. DL1
Pathway
hdl00260
Glycine, serine and threonine metabolism
hdl00270
Cysteine and methionine metabolism
hdl00450
Selenocompound metabolism
hdl00670
One carbon pool by folate
hdl01100
Metabolic pathways
hdl01110
Biosynthesis of secondary metabolites
hdl01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
hdl00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HALDL1_08400
00270 Cysteine and methionine metabolism
HALDL1_08400
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
HALDL1_08400
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HALDL1_08400
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hdl04147
]
HALDL1_08400
Enzymes [BR:
hdl01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
HALDL1_08400
Exosome [BR:
hdl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
HALDL1_08400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
AHG03615
LinkDB
All DBs
Position
1311725..1312942
Genome browser
AA seq
405 aa
AA seq
DB search
MDDRPRIETRAVGHGEDPGATLRGDVVSPIHLASTFALPELDTNLSLEDVDPAEGQFLYS
RLNNPTRHALEQRLASLEGGEHGFAFSSGTSAIATAVMASVEPGDHVVAFDDLYAGTRRL
LETLFRDRLGVDVSFVDATDPDNVADAVRPETTLLWMETPTNPLLKLCDVRAIADIAQDA
DARLGVDNTFLSPYFQTPLDLGADVVAHSTTKYLNGHSDSVGGALVTDDESFADDVAFLQ
QVGLGNVLSPFDAYLVLRGTKTLAPRMRDHEANALAIAEYLESHDAVSAVHYPGLESHPQ
HELAREQTAGYGGILSFELDGDFADAKRFLEALEEFALAVSVGGVESLAELPAGMTHEPI
PKAERDSQGITDSLIRISVGIEHVDDLVADLDRGFAAMRGQPVDQ
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccgcccccgcatcgagacccgcgcagtcggtcacggagaagaccccggagcg
acgctccgtggcgacgtcgtctcccccatccacctcgcgtccacgttcgccctcccggaa
ctcgacaccaacctcagtctggaggacgtcgaccccgccgagggacagttcctctactcc
cggctcaacaatccgacacgtcacgccctggagcagcgcctcgcctccctggagggcggt
gagcacggcttcgcgttctcctcgggcacgtcggccatcgccaccgcggtcatggcgtcc
gtcgaacccggcgaccacgtcgtcgccttcgacgacctgtacgccgggactcggcgcctc
ctcgagacgttgttccgcgacagactgggcgtcgacgtctcgttcgtggacgccaccgac
cccgacaacgtcgccgacgcggtccgccccgagacgacgctgctctggatggagacgccc
accaacccgctgctgaagctctgtgacgtccgggccatcgccgacatcgcccaggacgca
gacgcccgcctcggcgtcgacaacacgttcctcagcccgtacttccagaccccactcgac
ctcggcgcggacgtcgtcgcccactccacgacgaagtacctcaacggccacagcgactcc
gtcggcggggctctcgtcaccgacgacgagtcgttcgccgacgacgtggcgttcctccag
caggtgggtctcggcaacgtgctctcgccgttcgacgcctacctcgtgttgcgcggcacc
aagacgctcgcaccccggatgcgcgaccacgaggcgaacgcgctcgccatcgcggagtac
ctggagtctcacgacgcggtcagcgcggtccactaccccggactggagagccacccgcag
cacgaactcgctcgcgagcagaccgccggctacggcggcatcctctccttcgaactcgac
ggcgacttcgcggacgcgaagcggttcctggaggccctcgaggagttcgcgctcgcggtc
agcgtcggcggcgtcgagtctctcgccgaactccccgcggggatgacccacgaaccgatt
cccaaggccgagcgggattcccagggcatcaccgactcgctgatacggatctccgtcggg
atcgagcacgtcgacgacctcgtcgcggacctcgaccgcggcttcgcggcgatgcgcggc
cagccagtggaccagtag
DBGET
integrated database retrieval system