KEGG   Halobacterium sp. DL1: HALDL1_09710
Entry
HALDL1_09710      CDS       T03878                                 
Name
(GenBank) helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
hdl  Halobacterium sp. DL1
Brite
KEGG Orthology (KO) [BR:hdl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hdl03400]
    HALDL1_09710
Enzymes [BR:hdl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HALDL1_09710
    5.6.2.6  RNA 3'-5' helicase
     HALDL1_09710
DNA repair and recombination proteins [BR:hdl03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    HALDL1_09710
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C ResIII WH_Lhr AAA_25 AAA_19 Cas3-like_C_2 HypA AAA_30 Zn_ribbon_8 Asparaginase_C UvrD-helicase Zn_ribbon_PaaD
Other DBs
NCBI-ProteinID: AHG03844
LinkDB
Position
complement(1554334..1557162)
AA seq 942 aa
MTETRGMDAFSHLGPEVREALSERGFSTPTEPQRRAIPALADGRNGLVVAPTGTGKTETA
MLPVLNSIAEQGAPEGFAALYITPLRALNRDMRERLDWWGETLGIDVDVRHGDTTQYQRT
KQANDPPDVLVTTPETLQAMLSGEKLRNGLADVRHVVVDEVHELAGAKRGTQLSIGLERL
VELAGNFQRIGLSATVGDPKEVGAFLTGGRGCEIIEVDVASKVDFTVREPEVTRADERMG
NELMTSPEMASHVREIRRIVEAHDSVLVFVNTRQTAEALGSRFKELDANIGVHHGSLSKD
ARIEVEDQFKAGELDGLLCTSSMELGIDVGRIDHVVQYASPREVARLLQRVGRAGHRRDE
VSEGTVITGHPDDTFEALAIARRAAAGDVETTQIHHGSLDTVANQIVGIAMDFGETSARH
AYQILTRAYPFHDLKESTFREVALELHSNRVVYVDEEEDTISKSGGTWQYYYANLSMIPD
EETYDVYDMAAGRQVGTLDERFVVNFVEPGATFVQRGEMWRITNIDEEEEEVNVSPIEDP
AGEVPSWTGQEIPVPYDVAQEVGEMREVAGDQLAAGGTREGVAREFTTRYPTDQYTTEQA
LDQVSRQVEADTPVPTDDRLVVEQMGQTIGVNACFGHETNETLGRLLSSLLGQQTGSSVG
MDVGPYRIELEVPARVSANEVVDLLRETDPDHVEPLLELSLKRSDTLKFTLAQVAAKFGA
LKRWKGRDGVGLSRLLGALEDTPVYDEAIREVFHTDLDVERASAVLEAIQSDELDVEIVG
ERTAIGTGGRSSGQELLTPQNADASVVQAIRDRIQDDRVNLFCTHCKDWERETTVSRVSD
QPECPRCGSTRIAALSPWADEVVTAVRADEKDEEQEKQTERAYRNASIVQSHGKQAIIAL
SARGVGPQNAARVINRHREDEADFYRDILEREREYARTKAFW
NT seq 2829 nt   +upstreamnt  +downstreamnt
gtgactgagacgcgggggatggacgcgttctcgcacctcggccccgaggtccgcgaggcg
ctctccgagcgcggattctccacgcccacggagccacagcgccgcgcgattccggcgctc
gcggacgggcgaaacggcctcgtcgtcgcgccgactggcaccgggaagacggagacggcg
atgctcccggtgttgaacagcatcgccgagcagggggcgccggaggggtttgctgcgctg
tacatcacgccgctgcgggcgctcaaccgcgacatgcgcgagcgcctcgactggtggggg
gagacgctgggcatcgacgtcgacgtgcgccacggcgacacgacgcagtaccagcgcacg
aagcaggcgaacgacccgccggacgtgctcgtgacgacaccggagacgctgcaggcgatg
ctcagcggagagaaactgcggaacgggctcgccgacgtgcgccacgtcgtcgtcgacgag
gtccacgaactcgcgggcgcgaagcgggggacacagctctccatcggcctagagcgactc
gtcgagctggcggggaacttccagcgaatcggcctctctgccaccgtcggcgacccgaag
gaggtcggcgcgttcctcacggggggacggggctgcgaaatcatcgaggtggacgtggcc
tcgaaggtcgacttcacggtcagggaaccagaggtgacgcgggcggacgagcggatgggg
aacgaactgatgaccagccccgagatggcgagccacgtccgggagattcggcgcatcgtc
gaggcccacgactcggtgctcgtcttcgtgaacacgcgccagacggccgaggcgctgggc
tcgcggttcaaggaactcgacgcgaacatcggcgtccaccatgggtcgctgtcgaaggac
gcccgcatcgaggtcgaggaccagttcaaggccggggaactcgacggcctgctctgcacg
tcctcgatggaactcggcatcgacgtcgggcgcatcgaccacgtcgtgcagtacgcgtcg
ccccgggaggttgcccgcctgctccagcgcgtcggccgcgcgggccaccgccgcgacgag
gtcagcgagggcactgtcatcactggccacccggacgacacgttcgaggcgctcgctatc
gcccggcgggcggccgccggggacgttgagacgacccagatacaccacggtagcctcgac
accgtggcgaaccagatcgtcggcatcgcaatggacttcggtgagacgagcgcccgccac
gcctaccagatactcacccgggcgtacccgttccacgacctcaaggagtcgacgttccgc
gaggtggccctggaactccactcgaaccgcgtcgtctacgtcgacgaggaggaggacacc
atctccaaatctggcggcacgtggcagtactactacgcgaacctctcgatgattccggac
gaggagacgtacgacgtctacgacatggccgcgggccggcaggtcgggacactcgacgag
cgcttcgtcgtgaacttcgtcgaacccggcgcgacgttcgtccagcgcggggagatgtgg
cgcatcacgaacatcgacgaggaggaagaggaggtcaacgtctcgcccatcgaagacccg
gcgggcgaggtgccgtcgtggacaggccaggagattccagtcccctacgacgtggcccag
gaggtcggcgagatgcgcgaggtggccggcgaccagctcgccgcgggcgggacccgcgag
ggcgtggcccgcgagttcacgactcgctacccgaccgaccagtacaccaccgagcaggcg
ctcgaccaggtcagccggcaagtcgaggccgacacgccggtgccgaccgacgaccgactc
gtcgtcgagcagatgggacaaaccatcggcgtgaacgcctgcttcggccacgagaccaac
gagacgctcgggcgcctgctctcgtcactgctcggccagcagaccggctcctcggtgggg
atggacgtcggaccctaccgcatcgaactggaggttccggcgcgcgtgagcgccaacgag
gtggtcgacctgctccgcgagacggaccccgaccacgtcgaaccgctgctggaactcagc
ctgaagcgctcggacacgctgaagttcacgctcgcgcaggtcgccgcgaagttcggggcg
ctcaagcgatggaaaggtcgggatggcgtcggcctctcccgcctcctcggcgcgctcgag
gacacgccggtgtacgacgaggccatccgcgaggtattccacacggacctcgacgtcgaa
cgcgcgagcgccgtactcgaggccatccagtccgacgaactcgacgtggaaatcgtcggc
gagcgcaccgccatcggcaccggcgggcggtcgtccggtcaggagctactcaccccgcag
aacgccgacgcgagtgtcgtgcaggccatccgggaccgcatccaggacgaccgcgtgaac
ctcttctgcacgcactgcaaggactgggagcgcgagacgacggtgagccgcgtgagcgac
cagccagaatgcccgcgctgtgggtcgacgcgcatcgccgcgctgtcgccgtgggccgac
gaggtggtcaccgcggtccgggcggacgagaaggacgaggaacaggagaagcagaccgag
cgggcctaccggaacgcgagcatcgtccagagccacggcaagcaagcgataatcgcgctc
tccgcccgcggcgtcggcccgcagaacgccgcccgcgtcatcaaccgccaccgggaggac
gaggccgacttctaccgcgacatcctcgaacgcgagcgggagtacgcccgcacgaaggcg
ttctggtag

DBGET integrated database retrieval system