Halobacterium sp. DL1: HALDL1_10440
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Entry
HALDL1_10440 CDS
T03878
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hdl
Halobacterium sp. DL1
Brite
KEGG Orthology (KO) [BR:
hdl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hdl03400
]
HALDL1_10440
Enzymes [BR:
hdl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HALDL1_10440
DNA repair and recombination proteins [BR:
hdl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HALDL1_10440
Prokaryotic type
HALDL1_10440
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AHG03973
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All DBs
Position
complement(1687800..1689203)
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AA seq
467 aa
AA seq
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MELFWHRRDLRTADNLGLAAAADAGDVVPVFCFDDAVLDHAAPSRMAFMLDALAALRERY
RELGGDLLVRHGDPSAVLPDLAREFGADRVVWNHDYSGLARERDEAVRAALDDQGTAHEQ
VHDAVLHEPGAIRTNAGDPYSVYTYFWKKWRDREKADPAPEPEPDAVADVTGDELPDAAT
LGFEEPDAEIPAAGTDAARERLEAFCERDVFRYEDARDYPAERATSRLSADLKFGTLGVR
ELYERTEQAMTDADDDDERASVEEFQGQLAWREFYAQVLYFNPEVVTENFKEYAQPIEWR
DDPTELRAWKDGETGYPIVDAGMRQLRDEAYVHNRVRMLVAAFLTKDLLVDWREGYAHFR
EHLVDHDTANDTGGWQWAASTGTDAQPYFRVFNPTTQGERYDPDAEFVKRYVPELRDVPP
AKIHAWPDLSPEERDELAPDYPAPIVDHAERREEAIATFERARGDAD
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggaactgttctggcaccgccgggacctccgcaccgcggacaacctggggctcgccgcg
gccgcggatgcgggcgacgtggtcccggtcttctgcttcgacgacgctgtcctcgaccac
gccgcaccgtccaggatggcgttcatgctggacgccctcgccgcgctccgcgagcgctac
cgggaactcggcggcgacctgctcgtgcgccacggcgacccctccgccgtcctcccagac
ctcgctcgcgagttcggcgccgaccgcgtcgtctggaaccacgactactcggggctggcc
cgcgagcgcgacgaggcggtgcgcgcggccctcgacgaccagggcaccgcccacgagcag
gtccacgacgccgtcctccacgaaccgggcgcgatccggacgaacgctggcgacccgtac
tccgtgtacacgtacttctggaagaagtggcgcgaccgggagaaggccgacccggcgccg
gagccagaacccgacgccgtcgccgacgtgacgggcgacgaactaccggacgcggcgacc
ctcggcttcgaggaaccggacgccgagattccggctgccgggaccgatgcggcccgggag
cgactcgaagcgttctgcgagcgggacgtctttcgctacgaggacgcgcgagactacccc
gccgagcgcgcgacgtcccggctctcggcggacctcaagttcggcacgctcggcgtccgg
gaactgtacgaacggaccgagcaggcgatgaccgacgccgacgacgatgacgaacgcgcg
agcgtcgaagagttccaggggcaactcgcctggcgggagttctacgcgcaggtgctgtac
ttcaacccggaggtagtcacggagaacttcaaggagtacgcccagcccatcgagtggcgg
gacgaccccacggaactccgcgcgtggaaggacggcgagacgggctaccccatcgtggac
gccgggatgcgacagctcagagacgaggcgtacgtgcacaaccgcgtccggatgctcgtc
gccgcgttcctcacgaaagacctgctggtggactggcgcgaggggtacgcccatttccgc
gagcacctcgtcgaccacgacacggccaacgacaccggcggctggcagtgggccgcctcg
acaggcaccgacgcccagccgtacttccgggtgttcaacccgacgacgcagggcgagcgc
tacgacccggacgcggagttcgtcaagcggtacgtccccgagttgcgtgacgttccgccc
gcgaaaatccacgcgtggcctgacctctcgcccgaggagcgcgacgaactcgccccggac
tacccggcccccatcgtcgaccacgcggagcgccgcgaggaagccatcgcaacgttcgag
cgggcgcgcggcgacgcggactga
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