Halobacterium sp. DL1: HALDL1_11640
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Entry
HALDL1_11640 CDS
T03878
Name
(GenBank) DNA-directed RNA polymerase subunit D
KO
K03047
DNA-directed RNA polymerase subunit D [EC:
2.7.7.6
]
Organism
hdl
Halobacterium sp. DL1
Pathway
hdl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hdl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HALDL1_11640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hdl03021
]
HALDL1_11640
Enzymes [BR:
hdl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HALDL1_11640
Transcription machinery [BR:
hdl03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
HALDL1_11640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Thioredoxin_14
Motif
Other DBs
NCBI-ProteinID:
AHG04178
LinkDB
All DBs
Position
1908269..1909012
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AA seq
247 aa
AA seq
DB search
MSTDFDVEFIERGDRESLFVVRNITPAFANGIRRAILADVPTLSIEDVRFVENSSVMFDE
QIALRLGLVPLTTPDDFAVGDTVTLALDVEGPGTAYSGDLVSSDPDVEAADKNVPIIELK
DDQRLEFEADAVLAHGRDHAKHQGGVAVGYRHLQQVDVVGDRGEYADDEPEMIRGVVEDD
GELVRTEEFDNDLTERYPEQEVEISDVPGAFVFHVESDGSMPVSELVLRAVDTLVDRADE
LEQAVQL
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgagtacggacttcgacgtcgaattcatcgaacgcggcgaccgggaatccctgttcgtc
gtccgcaacatcacgccggcgtttgcgaacggcatccggcgagcaatcctcgccgacgtg
ccgacgctctccatcgaggacgtgcggttcgtggagaactccagtgtgatgttcgacgaa
cagatcgcgctccgtctcgggctggtgccgctgaccacgcccgacgacttcgcggtgggc
gacaccgtgacgctcgcgctcgacgtcgagggtccgggcacggcgtactccggcgacctc
gtcagttccgatccggacgtcgaggccgccgacaagaacgtccccatcatcgagctcaaa
gacgaccagcgtctcgagttcgaggccgacgcggtgttggcccacggccgcgaccacgcc
aaacaccagggcggcgtcgctgtcggctaccgacacctccagcaggtggacgtggtcggg
gaccgcggtgagtacgcggacgacgagccagagatgattcgaggcgtcgtggaagacgac
ggcgaactcgtgcggaccgaggagttcgacaacgacctcaccgagcgctatccggagcag
gaggtcgaaatttcggacgtccccggcgcgttcgtcttccacgtcgaatccgacggctcg
atgcccgtgagcgaactggtgctccgggcggtcgacaccctggtcgaccgcgcggacgaa
ctcgaacaggcagtccaactgtaa
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