Halobacterium sp. DL1: HALDL1_11945 Help Entry HALDL1_11945      CDS       T03878                                  Name (GenBank) helicase   KO K10844   DNA excision repair protein ERCC-2 [EC:5.6.2.3] Organism hdl  Halobacterium sp. DL1 Pathway hdl03022   Basal transcription factors hdl03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:hdl00001]  09120 Genetic Information Processing   09121 Transcription    03022 Basal transcription factors     HALDL1_11945   09124 Replication and repair    03420 Nucleotide excision repair     HALDL1_11945  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:hdl03021]     HALDL1_11945    03036 Chromosome and associated proteins [BR:hdl03036]     HALDL1_11945    03400 DNA repair and recombination proteins [BR:hdl03400]     HALDL1_11945 Enzymes [BR:hdl01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      HALDL1_11945 Transcription machinery [BR:hdl03021]  Eukaryotic type   RNA polymerase II system    Basal transcription factors     TFIIH      HALDL1_11945 Chromosome and associated proteins [BR:hdl03036]  Eukaryotic type   Centrosome formation proteins    Spindle formation proteins     HALDL1_11945 DNA repair and recombination proteins [BR:hdl03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TFIIH complex      HALDL1_11945 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Helicase_C_2 DEAD_2 DEAD ResIII PhoH AAA_11 SNF2-rel_dom AAA_30 AAA_19 nSTAND3 LysR_substrate AAA_25 COG4_N Motif Other DBs NCBI-ProteinID:  AHG04227 LinkDB All DBs Position complement(1950961..1953351) Genome browser AA seq 796 aa AA seqDB search MADEPWREFFGFDAPYDQQADAIESAIDAGEQGGYLAMEGPCGTGKTMAALTAAAHLVRN GDQYSRVLVVTPVKQQLEQFVADLRTMNAGMEDPLDGVALVGKRDLCPYGREDAFPRDAS VHDRCEDLRESTAGLVEGDGDSFDGQDARELVELRAAEALDEPWWDPATGRELARSARAD VDHNLSQAPLATAGVDSPYVQHQPTAPEDLSEGDPPLFCPFEADWYGRNKGSPVGFDAGR HNVVTSEEVLPESVEYGTCPHRVQQVLLDHADVVIGNYNHLFDPKTRGLTEHLLDEQTFV VVDEAHRLEERVRDLLSDRVGRHTLARARNDVRTLLTEARQSESNRQQVADHLSSYDLSM DAVEATVEFLGDVLDWLDDRVAEYLAEEGHDPNSARNLPEYDHEVPLRDPETDEPDDLTR WAEKQGYTGDLWRSLADVGTAVEAILEDDGDRSAVCGAVGVTLQRWWERDHATYFREIEL EHVPKDSGRAGAAWAEAYTPALVTYNCMPARALRETFAGLGGGVLMSATLEPLDVFREVT GLDRLEAGAGTAEARPVVERRYDLRFPRENRASFLVDATPFTARNRGDPTRENDNRTREE YRYVLRTIARSPGNVLVCMPNYREAAWAGDYLADAVEKDVLVDESSSNEVTDDLKAEFFR GDGKVLVTSTRGTLTEGVDYDGEKLAACAVVGVPLVNVGSPRVRAVRRAYADAFGEDKAF EYALTVPAVRRARQAIGRVIRGPEEVGVRALVGQRYVEGARHSVHGYLGPGERAEFTRMT PEFLGDQLDAFWSERD NT seq 2391 nt NT seq  +upstreamnt  +downstreamnt atggccgacgagccgtggcgcgagttcttcggattcgacgcgccgtacgaccagcaagcc gacgccatcgaatccgccatcgacgccggggagcagggcggctacctcgcgatggagggg ccctgtggcaccgggaagacgatggccgcgctcaccgcggccgcccacctcgtgcggaac ggcgaccagtacagccgcgtgctggtcgtcacgccggtgaaacagcaactggagcagttc gtcgccgacctccggacgatgaacgcggggatggaggaccccctcgacggcgtcgcactc gtcgggaagcgcgacctctgtccgtacggtcgggaggacgcgttcccccgggacgcgagc gtccacgaccgctgcgaggacctccgcgagtcgacagcgggactcgtggagggcgacggc gacagtttcgacggacaggacgcccgcgaactcgtggaactgcgggcggccgaggccctc gacgaaccgtggtgggaccccgcgacggggcgcgaactggcgcgctcggcccgcgcggac gtcgaccacaacctctcgcaggcgccgctcgcgacggcgggcgtggactcgccgtacgtc cagcaccagcccacggcccccgaggacctctcggagggcgacccgccgctgttctgcccg ttcgaggccgactggtacgggcgcaacaaggggtcgccggtgggcttcgacgccggtcga cacaacgtcgtcacgagcgaggaggtgctcccggagagcgtcgagtacggcacctgtccc caccgcgtccagcaggtgctgctcgaccacgcggacgtcgtcatcgggaactacaaccac ctcttcgacccgaagacgcgcgggctcaccgaacacctcctcgacgagcagacgttcgtc gtggtcgacgaagcccaccgcctggaggagcgcgtgcgggacctgctctcggacagggtg ggccgccacacgctcgcccgcgccaggaacgacgtgcggacgctgctgacggaggccagg cagagcgagtcgaaccgccagcaggtcgccgaccacctcagcagctacgacctctcgatg gacgccgtggaggccaccgtcgagttcctcggggacgtcctcgactggctggacgaccgg gtcgcggagtacctcgccgaggagggccacgacccgaacagcgcccgcaacctcccggag tacgaccacgaggtcccgctcagggaccccgagacggacgaaccggacgacctcacgcgg tgggccgagaagcaggggtacaccggcgacctctggcggtcgctggcggacgtcggcacc gccgtcgaggccatccttgaggacgacggcgaccgctcggcggtttgcggcgcggtcggg gtcaccctccagcggtggtgggagcgcgaccacgccacctacttccgggagatcgaactc gaacacgtccccaaggactcgggccgcgcgggtgccgcgtgggcggaggcgtacacgcca gcgctcgtgacgtacaactgtatgccggcgcgggcgctccgcgagacgttcgcgggactc ggcggcggcgtgctgatgagcgcgaccctcgaaccgctcgacgtcttccgcgaggtcacc gggctggaccgcctcgaagcgggcgccggcaccgccgaagcccgcccggtcgtcgagcgc cgctacgacctccgattcccccgcgagaaccgcgcgagtttcctcgtggacgcgacgccg ttcacggcccgcaaccgcggcgacccgacgcgcgagaacgacaaccggacgcgcgaggag taccgctacgtcctccgcaccatcgcgcgctcgcccgggaacgtcctcgtctgtatgccg aactaccgggaggcggcgtgggccggcgactacctcgccgacgccgtcgagaaggacgtg ctcgtcgacgagtcctcctcgaacgaagtgacggacgacctgaaggcggagttcttccgc ggtgacgggaaggtcctcgtcaccagcacgcgagggacgctgacggagggcgtcgactac gacggcgagaaactcgcggcgtgcgccgtcgtcggcgtccctctcgtcaacgtcgggtca ccgcgcgtgcgggcggtccgccgggcgtacgcggacgccttcggcgaggacaaggccttc gagtacgcgcttaccgttcccgccgtgcgcagggcgcggcaggccatcgggcgcgtcatt cgtgggccagaggaggtcggcgttcgtgcgctcgtcgggcagcgctacgtggagggcgcg cgccactcggtccacggctacctcgggccgggcgagcgcgcggagttcacccgcatgacc ccggagttcctcggcgaccagctggacgcgttctggtcagagcgagactga

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