Halobacterium sp. DL1: HALDL1_12040
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Entry
HALDL1_12040 CDS
T03878
Name
(GenBank) adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
hdl
Halobacterium sp. DL1
Pathway
hdl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hdl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HALDL1_12040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hdl03400
]
HALDL1_12040
Enzymes [BR:
hdl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
HALDL1_12040
DNA repair and recombination proteins [BR:
hdl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HALDL1_12040
Prokaryotic type
HALDL1_12040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
DUF7770
Motif
Other DBs
NCBI-ProteinID:
AHG04242
LinkDB
All DBs
Position
complement(1968758..1969681)
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AA seq
307 aa
AA seq
DB search
MTDGEGAWALPGDVDAVRDALVSWYEADHRAFPWRETTDPYEILVSEVMSQQTQLSRVEE
AWAAFLERWPTTADLAAADRADVVGFWSANSLGYNNRAKYLHEAAQQVETDYAGEFPETP
GELSELMGVGPYTANAVASFAFDNGDAVVDTNVKRVLYRAFDVPDDDSAFEEAANELMPE
GESRVWNNAVMELGGVACGKTPKCDAADCPWREWCGAYASGDFSAPDVPQQSTFEGSRRQ
KRGRVVGALREHGDLVLDELGPRVRVDYTPEGDGGQVWLRDLLADLEADGLVEVNERDGE
PVARLRR
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgactgacggcgagggagcgtgggcgctcccgggggacgtcgacgccgtgcgcgacgcg
ctcgtctcgtggtacgaggccgaccaccgcgcgttcccgtggcgggagacgaccgacccc
tacgagatcctcgtctccgaggtgatgagccagcagacccagctctcccgcgtcgaggag
gcgtgggcggcgttcctcgagcggtggccgacgaccgccgacctggcggccgccgaccgc
gccgacgtcgtggggttctggtccgcgaacagcctcgggtacaacaaccgcgcgaagtac
ctacacgaggcagcccagcaggtcgagaccgactacgccggcgagttcccagagacgccc
ggcgaactctcggaactcatgggcgtcgggccctacaccgccaacgccgtcgcgtcgttc
gcgttcgacaacggggacgccgtcgtggacacgaacgtcaagcgcgtgctctaccgcgcc
ttcgacgtgcccgacgacgactcggcgttcgaggaagccgcgaacgaactcatgcccgag
ggggagtcccgcgtctggaacaacgccgtcatggaactgggtggggtggcctgcgggaag
acgccgaagtgcgacgcggctgactgcccgtggcgcgagtggtgcggggcgtacgcctcg
ggcgacttctccgcgcccgacgtcccccagcagtccacgttcgaggggagtcggcgccag
aagcggggccgcgtcgtcggcgcgctccgcgaacacggcgacctcgtgctcgacgaactc
ggtccccgggtgcgcgtcgactacacgccagagggcgacggcggccaggtgtggctccgg
gacctgctcgcggacctcgaagcggacggactggtcgaggtgaacgagcgcgacggggaa
cccgtcgcgcggctccgccgatga
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