Halobacterium sp. DL1: HALDL1_12245
Help
Entry
HALDL1_12245 CDS
T03878
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hdl
Halobacterium sp. DL1
Pathway
hdl00260
Glycine, serine and threonine metabolism
hdl00460
Cyanoamino acid metabolism
hdl00630
Glyoxylate and dicarboxylate metabolism
hdl00670
One carbon pool by folate
hdl00680
Methane metabolism
hdl01100
Metabolic pathways
hdl01110
Biosynthesis of secondary metabolites
hdl01120
Microbial metabolism in diverse environments
hdl01200
Carbon metabolism
hdl01230
Biosynthesis of amino acids
hdl01240
Biosynthesis of cofactors
hdl04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
hdl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HALDL1_12245 (glyA)
09102 Energy metabolism
00680 Methane metabolism
HALDL1_12245 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HALDL1_12245 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HALDL1_12245 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HALDL1_12245 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HALDL1_12245 (glyA)
Enzymes [BR:
hdl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HALDL1_12245 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AHG04277
LinkDB
All DBs
Position
2008438..2009685
Genome browser
AA seq
415 aa
AA seq
DB search
MSYEDVREVDPAVADALVGERERQNGTLAMIASENHVSEAVLEAQGSELTNKYAEGYPGK
RYYGGCEFADDVETLAIDRAKELFGADHVNVQPHSGSSANMGVYFATLDPGDKILSLDLT
HGGHLSHGHPANFAGQLYEVEQYEVDPETGRLDYDSLHEIAEEFEPDMIVSGFSAYPREV
EWERIQEAADAVGALHTADIAHITGLVATGEHASPVGVADFVTGSTHKTIRAGRGGIIMC
DEEYADDVDSAIFPGAQGGPLMHNIAGKAVGFKEALQPEFEDYAEQVVENAKVLGETLQD
HGFSLVSGGTDTHLVLVDLRDSHPDISGGDAEDELEEVGIVLNANTVPDESRSAFDPSGI
RAGTPALTTRGFDAEAMETVGDCIAKVIDNVGDGEVYAEVAATVEDLTNEYPLYE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgaggatgtccgggaggtagacccggccgtcgcggacgcgctcgtgggcgaa
cgggagcgccagaacggtacgctcgcgatgatcgccagcgagaaccacgtcagcgaggcc
gtcctggaggcccagggcagcgaactcacgaacaagtacgccgagggctaccccggcaaa
cgctactacggcggctgcgagttcgccgacgacgtcgagaccctcgccatcgaccgcgcg
aaggagctgttcggtgccgaccacgtcaacgtccagccccacagcgggtcgtccgcgaac
atgggcgtctacttcgcgacgctcgaccccggcgacaagattctctccctggacctcacg
cacggcggccacctgagccacggccacccggcgaacttcgctgggcagctgtacgaggtc
gagcagtacgaggtcgacccggagacgggccgcctcgactacgactccctccacgagatc
gccgaggagttcgaaccggacatgatcgtctccgggttctccgcgtacccccgggaggtc
gagtgggagcgcatccaggaggcagcggacgccgtcggcgcgctccacacggcggacatc
gcccacatcaccggcctcgtcgcgacgggcgaacacgcctccccggtcggcgtcgcggac
ttcgtcaccgggtcgacgcacaagaccatccgcgcgggccgcggcggcatcatcatgtgc
gacgaggagtacgccgacgacgtcgactcggccatcttcccgggcgcacagggcggcccc
ctgatgcacaacatcgcggggaaggccgtcggcttcaaggaggccctccagccggagttc
gaggactacgccgaacaggtcgtcgagaacgcgaaagtgctcggtgagaccctccaggac
cacggcttctcgctggtctcgggcggcaccgatacccacctcgtgctcgtcgatctccgg
gactcccacccggacatctcgggcggtgacgccgaggacgaactcgaggaggtcgggatc
gtgctgaacgcgaacaccgtcccggacgagtcccggtcggcgttcgacccgtctggcatc
cgcgccggcacgcccgcgctcaccacccgcggcttcgacgccgaggcgatggagacggtc
ggggactgcatcgcgaaggtcatcgacaacgtcggcgacggcgaggtgtacgcggaggtc
gcggcgaccgtcgaggacctcacgaacgagtacccgctgtacgagtag
DBGET
integrated database retrieval system