Halobacterium sp. DL1: HALDL1_13150
Help
Entry
HALDL1_13150 CDS
T03878
Name
(GenBank) CdcH
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hdl
Halobacterium sp. DL1
Pathway
hdl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hdl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
HALDL1_13150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hdl03019
]
HALDL1_13150
03009 Ribosome biogenesis [BR:
hdl03009
]
HALDL1_13150
04131 Membrane trafficking [BR:
hdl04131
]
HALDL1_13150
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hdl04147
]
HALDL1_13150
Messenger RNA biogenesis [BR:
hdl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
HALDL1_13150
Ribosome biogenesis [BR:
hdl03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
HALDL1_13150
Membrane trafficking [BR:
hdl04131
]
SNARE
SNARE associated proteins
Others
HALDL1_13150
Autophagy
Aggrephagy
Other aggrephagy associated proteins
HALDL1_13150
Exosome [BR:
hdl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HALDL1_13150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
AAA_16
RuvB_N
AAA_5
TIP49
AAA_22
AAA_2
AAA_33
AAA_14
nSTAND3
NPHP3_N
RNA_helicase
AAA_28
IstB_IS21
AAA_7
Mg_chelatase
Sigma54_activat
AAA_3
ABC_tran
AAA_18
DUF815
NB-ARC
AAA_17
Parvo_NS1
ATPase
AAA_24
AAA_30
TsaE
AAA_11
PhoH
NACHT
Vps4_C
SLFN-g3_helicase
AAA_lid_PRS2_C
KAP_NTPase
IPT
Motif
Other DBs
NCBI-ProteinID:
AHG04436
LinkDB
All DBs
Position
2179954..2182179
Genome browser
AA seq
741 aa
AA seq
DB search
MNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGAETTAAKVWRADRQDWN
TDTIRIDGFTRQNADVGIGERVKIRKAEAEKADRLVLAPPEEASVQFGSDAAGMVKRQIL
KRPVVARDIVPVMSSTNHPFMRSPGQAIPLIAVETEPDGVCLVTEDTEVELREEPISGFE
RTGGGITYEDIGGLESEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLA
KAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDAKEESPAIIFIDELDSIAPKRED
VTGEVERRVVAQLLSLMDGLEERGDVTVIAATNRVDAIDPALRRGGRFDREIEIGVPDEV
GREEILKIHTRGMPLSDDVNLGSLADDTHGFVGADIESLTKEAAMRALRRYLPEIELDEE
DIPPSLIDRMIVKREDFKGALNEVEPSAMREVLVELPKLSWDDVGGLDDAKDNIKESVEW
PLNQPEKFTRMGVDPPAGVLLYGPPGTGKTLMAKAVANETDANFISVRGPQLLSKWVGES
EKAIRQTFRKARQVSPTVIFFDELDSLAPGRGQDVGNNVSERVVNQLLTELDGLEEMEEV
MVIAATNRPDIIDPALIRSGRFDRLVQVGQPDVEGREQILKIHSADIPLAPDVSLRELAE
ITDGYVGSDLANITREAAIEALREDENAEEVEMRHFRRAMEDVRPTITDDLMDYYDRVEE
QFKGSQNPETDRRRGGHIGFQ
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagttcaactcgaggtggcgaaagcctaccccaacgactcggggcggggtatc
gcccgcctcgaccccgacacgctcctgcacctgaagctcagcccgggtgacatcatcgag
atcgagggtgccgaaaccactgccgcgaaggtgtggcgtgccgaccggcaggactggaac
acggacaccatccgcatcgacggcttcacgcgccagaacgccgacgtcggcatcggcgaa
cgcgtcaagattcggaaggccgaggccgagaaggccgaccgtctcgtgctcgcgcccccg
gaggaggcgagtgtccagttcggctccgacgcggccggaatggtcaagcgccagattctg
aagcggccggtcgtcgctcgcgacatcgtcccggtgatgtcgagcacgaaccaccccttc
atgcggtcgccgggacaggccatcccgctcatcgccgtcgagaccgaacccgatggcgtc
tgtctcgtcaccgaggacaccgaggtggaactgcgcgaggagccgatcagcggcttcgag
cgcaccggcggcggcatcacgtacgaggacatcggcggcctcgagagcgagatccagcgc
gtccgggagatggtcgagctcccgatgaaacacccccagatcttccagaagctcggcatc
gagccgccacagggggtgttgctccacgggccgccgggcacggggaagacgctgctcgcg
aaggccgtcgccaacgagacgtccgcgagcttcttctccatcgcgggcccggagattatc
tccaagtactacggcgagtccgaacagcaactcagagagatattcgaggacgctaaagag
gagtcgccggccatcatcttcatcgacgaactcgactccatcgccccgaagcgcgaggac
gtcaccggcgaggtcgagcggcgtgtcgtcgcacagctcctgagcctgatggacggcctc
gaggagcgcggcgacgtgaccgtcatcgcggcgacgaaccgcgtcgacgctatcgacccc
gcgctgcgccgcggtggccgcttcgaccgcgagatcgagatcggcgtgccggacgaggtc
ggccgcgaggagatcctgaagatccacacgcggggcatgccgctgtccgacgacgtcaac
ctcggttcgctcgccgacgacacccacggcttcgtcggcgccgacatcgagagcctcacg
aaggaggccgcgatgcgcgcgctccggcgctacctccccgagatagagctcgacgaggag
gacatcccgccgagcctcatcgaccgcatgatcgtcaagcgtgaggacttcaagggggcg
ctcaacgaggtcgagccctccgcgatgcgggaggtcctcgtcgaactcccgaagctctcg
tgggacgacgtcggcggtctcgacgacgccaaggacaacatcaaggagtccgtcgagtgg
ccgctcaaccagcccgagaagttcacccggatgggcgtggacccgcccgccggcgtgctg
ctgtacgggccgccgggcaccggcaagacgctgatggcgaaggccgttgccaacgagacg
gacgccaacttcatcagcgtgcgcggcccccagctcctctcgaagtgggtcggcgagtcc
gagaaggccatccggcagacgttccggaaggcccgccaggtctcaccgacggtcatcttc
ttcgacgagctggacagcctcgcgcccggccgcgggcaggacgtcgggaacaacgtctcc
gagcgcgtcgtcaaccagctcctgacggagctcgacggcctcgaggagatggaggaggtg
atggtcatcgccgcgaccaaccgccccgacatcatcgacccggcgctcatccggagcggg
cgcttcgaccgcctcgtgcaggtcggccaacccgacgtggagggccgcgagcagatcctg
aagatccactccgcggacatcccgctcgcgccggacgtcagcctccgcgaactcgccgag
atcacggacggctacgtcggcagcgacctggcgaacatcacccgcgaggccgccatcgag
gcgctccgcgaggacgagaacgccgaagaggtcgagatgcggcacttccgccgcgccatg
gaggacgtccgccccaccatcacggacgacctcatggactactacgaccgcgtcgaggag
cagttcaagggcagccagaaccccgagacggaccgccgccgcggcggccacatcggcttc
cagtaa
DBGET
integrated database retrieval system
