Halobacterium sp. DL1: HALDL1_13445
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Entry
HALDL1_13445 CDS
T03878
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hdl
Halobacterium sp. DL1
Brite
KEGG Orthology (KO) [BR:
hdl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hdl03016
]
HALDL1_13445
Enzymes [BR:
hdl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HALDL1_13445
Transfer RNA biogenesis [BR:
hdl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HALDL1_13445
Prokaryotic type
HALDL1_13445
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
DKCLD
PUA
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
AHG04488
LinkDB
All DBs
Position
2227070..2227960
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AA seq
296 aa
AA seq
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MLRSAPEDRDPEAILEFGVLNLDKPPGPSAHQVSAWVRDMTGVEKAAHAGTLDPKVTGCL
PILTGAATRLAPALLEGPKEYVTVLELHADPPANLESVVAEFEGPTYQKPPRKSAVARRL
RVREIYDLDVLEVENRQALLRIRCESGTYVRKLCHDLGRALGTGAHMGHLRRTATTPFDD
TDLVTLQDLSDALAWYRDEDDTDPPGSPEEALRAVVAPAERALGHLPSVTIAPSAAAEVA
EGAPVYAPGVLDADPADRDALVACYTPDRAAVCLGRLVGDPDADSGTVVSLERVLV
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgctccgctccgcccccgaggaccgcgaccccgaagccatcctggagttcggcgtcctg
aacctcgacaagccgcccggcccctccgcccaccaggtgtcggcgtgggtccgggacatg
accggcgtggagaaggccgcccacgcgggcacgctcgacccgaaggtgacgggctgtctc
ccgatactcacgggtgcggcgacccgcctcgcgcccgcgctcctcgaaggccccaaggag
tacgtcaccgtcctcgaactccacgccgacccgcccgccaacctcgaatccgttgtggcg
gagttcgagggaccgacctaccagaagcccccgcggaagtcagcggtggcgcgccgcctc
cgcgtccgcgagatctacgacctcgacgtgctggaggtcgagaaccgacaggcgctcctg
cggatccgttgtgaatccgggacgtacgtccggaagctctgtcacgacctggggcgcgcc
ctgggcaccggcgcccacatgggccaccttcggcggaccgcaaccacgcccttcgacgac
accgacctcgtcacgctccaggacctctcggacgccctcgcgtggtaccgcgacgaggac
gacactgacccgcccgggagtccggaggaagcgctccgggcagtggtcgcgcccgccgaa
cgcgcactcggccacctcccgagtgtcaccatcgcgccctcggccgccgccgaagtcgca
gagggcgcgccagtgtacgcaccgggggtcctcgacgcggaccccgccgaccgcgacgcg
ctcgtcgcgtgttacacgcccgacagagcggcggtctgtctcggccgcctcgtcggcgac
cccgacgccgacagcggaacggtcgtctccctcgaacgcgtgctcgtctga
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