Halobacterium sp. DL1: HALDL1_14940
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Entry
HALDL1_14940 CDS
T03878
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hdl
Halobacterium sp. DL1
Brite
KEGG Orthology (KO) [BR:
hdl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hdl03016
]
HALDL1_14940
Enzymes [BR:
hdl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HALDL1_14940
Transfer RNA biogenesis [BR:
hdl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HALDL1_14940
Prokaryotic type
HALDL1_14940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AHG04739
LinkDB
All DBs
Position
complement(2493755..2494549)
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AA seq
264 aa
AA seq
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MPRRAFRVAYDGRPYYGFQRQPDVTTVEDELFGALRRLDVFEGEKPPGYAAAGRTDAGVS
ARAQTIAFDAPDWLVPSALNTELPGPVDAWASADAPPDFHATHDANWREYSYYLLSPEAD
DSRGRRALDRLTGEHDFHNLTPDDRNTVRALSGSLVCEGDFLVLTLRAEGFCRELVRRVV
SLVREVAAGASFDRIDQLLGSEPVDGRAGVPPADPHPLVLHDVDYDLDFSVDEEAAAHAR
ERFAALRDDRLALAAVAGHVADGV
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtcgcgcgttccgcgtcgcctacgacggtcgcccctactacggcttccagcgc
cagccggacgtgacgaccgtcgaggacgaactgttcggcgcgctccggcgactcgacgtc
ttcgagggcgagaaacccccgggctacgccgcggcgggtcgcacggacgcgggcgtctcg
gcgcgcgctcaaaccatcgcgttcgacgcacccgactggctcgtgccgtcggcgctgaac
accgaactccccggccccgtcgacgcgtgggccagcgccgacgccccacccgacttccac
gcgacccacgacgcgaactggcgcgagtacagctactaccttttgagtccagaggccgac
gactcgcgcggccgccgcgcactggaccggctcaccggcgagcacgacttccacaacctc
acgcccgacgaccggaacacggtccgggcactctccgggtcactggtgtgcgaaggcgac
ttcctcgtcctcacgctgcgcgccgaggggttctgccgggaactcgttcgccgcgtcgtc
tcgctcgtgcgggaggtcgcggccggcgcgtcgttcgaccgcatcgaccaactactcggt
tcggaaccggtcgacggccgggcgggcgtcccgccggcggacccgcacccgctggtgctc
cacgacgtggactacgacctcgacttctcggtggacgaggaagccgcggcgcacgcccgc
gagcggttcgccgcgctccgggacgaccgcctcgcgctcgcggcggtcgccggccacgtc
gcggacggcgtctga
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