Halobacterium sp. DL1: HALDL1_16030
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Entry
HALDL1_16030 CDS
T03878
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hdl
Halobacterium sp. DL1
Pathway
hdl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hdl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HALDL1_16030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hdl03021
]
HALDL1_16030
Transcription machinery [BR:
hdl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HALDL1_16030
Prokaryotic type
Archaeal type
TFB
HALDL1_16030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
FYVE
DUF6398
RB_B
zf-B_box
Motif
Other DBs
NCBI-ProteinID:
AHG04930
LinkDB
All DBs
Position
complement(2694385..2695242)
Genome browser
AA seq
285 aa
AA seq
DB search
MSQSANCPECEGVVRKQETERVCTDCGLVVCEDRIDRGPEWRSFDDDDTNPERTGAPLTR
SRHDRGLSTEIGRSTRLKGRKRRKFARLRRQHKRASIGSKADRNQVYGFTEIRRIVGALG
LPRSVRDQACALFDSAQTEDLLRGRSIEGFAAAAVYAVCRTNGLSRTLAEIEHVSRGDES
ELSAAYDAMNRDLGLPTGPIDPRDYVPRYASELDLSTDVERSAREYVDIAERRNLLSGRN
PSGVAAACLYAGAEDCGAALTQADAADVADVTPVTLRSTYYDLQD
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgagccagtcagcgaactgccccgagtgcgagggcgtcgtgcgcaagcaggagaccgaa
cgcgtctgcaccgactgcggcctcgtggtctgcgaggaccgcatcgaccgcggcccggag
tggcggtcgttcgacgacgacgacacgaaccccgaacgcacaggagcgccgctcacgcgc
tcccgccacgacaggggcctctcgacggagatcggtcgctcgacgcgactgaagggccgc
aagcgccggaagttcgcgcgcctccgccgccagcacaagcgcgccagcatcgggtcgaaa
gccgaccggaaccaggtgtacgggttcacggagatccggcgcatcgtcggcgcgctcggg
ctcccgcggagcgtccgcgaccaggcgtgtgcgctgttcgactccgcccagaccgaggac
ctgctccgcgggcgctcaatcgaggggttcgccgcggcggctgtgtacgcggtctgccgc
acgaacggcctctcccgcacgctcgcggaaatcgagcacgtgtcccgcggcgacgagtcg
gagctctcggcggcctacgacgcgatgaaccgcgacctcggcctcccgaccggtcccatc
gacccccgtgactacgtcccgcggtacgccagcgaactcgacctctccacggacgtcgag
cgcagcgcccgcgagtacgtcgacatcgccgagagacggaacctcctctctgggcgcaac
ccgagtggggtcgccgctgcgtgcctctacgctggcgccgaggactgtggggcggcgctc
acgcaggccgacgccgcggacgtcgcagacgtaacgccggtgacgctgcgctcgacgtac
tacgacctgcaggactga
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