Hyphomicrobium denitrificans ATCC 51888: Hden_0009
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Entry
Hden_0009 CDS
T01265
Name
(GenBank) penicillin-binding protein, 1A family
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
hdn
Hyphomicrobium denitrificans ATCC 51888
Pathway
hdn00550
Peptidoglycan biosynthesis
hdn01100
Metabolic pathways
hdn01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
hdn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Hden_0009
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Hden_0009
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
hdn01003
]
Hden_0009
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hdn01011
]
Hden_0009
Enzymes [BR:
hdn01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
Hden_0009
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Hden_0009
Glycosyltransferases [BR:
hdn01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
Hden_0009
Peptidoglycan biosynthesis and degradation proteins [BR:
hdn01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
Hden_0009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Transket_pyr
Motif
Other DBs
NCBI-ProteinID:
ADJ21837
UniProt:
D8JPE6
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All DBs
Position
11112..13448
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AA seq
778 aa
AA seq
DB search
MLRVLIATIRFCAWVVGKALGLGKTPAPPTLPAPFQSVAQQAFDFGDEPVPAQPSPPQQR
TASGSLLGRFKLKYRLALSVGVAATGGIILTFAAMMVYYTVVFPDPLALRNNDRAPLIRI
LARDGTTIAERGAAHEYVRLADLPKLIPAAVVATEDRRFFDHYGVDPFGMFRAMFANLRA
GRFAQGGSTLTQQLAKNLFLTQERTLTRKIAELGLALWLEVRLTKEEILELYLNQCYFGA
GAYGVGSASERYFGKPARSLNLAEAAVIAGLLKAPSKYSPATNPDAARERGRVVVSLMRD
AGFISPEQEKLVLAQPVVFADPKTTAVAPDTGYVVDYILDQMPPISQTASGEVIVQTTLD
RDLQRSAQKIVKDTLARKGAAFGASQAALVVLDKEGGIRALVGGRDYAESQFDRAVKAKR
QPGSAFKPFVYLAALDRGMTPDSVMFDAPVTIGDWSPKNDNNKYAGEITLRQALAQSVNT
VAVRLNQDVGEGRTIAVARRLGIRSDLHEGPSLALGTSEVSLLEMSGAYAVFSNGGEAVE
PHIISQVRIGNGSPVYVSPPPRTDRVASLDEIGALNDMLNAVVVSGTGRRAALPDRPAAG
KTGTTQDFRDAWFIGYTSQLTAGVWVGNDNGKPMIRTTGGSLPAEIWNQIMRVAHQGLPS
APLPGTVVSRPEPEDAILPVDEAAHVSKAPSAPRVVQYHEALPSAARDAAHQRTTPPRVA
EKAADIQPPSQSHPTSNIDDDFIARALADELEQQRDAMPEQEPVEARPGVAAFAIGAR
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
gtgttgcgggtcctgatagcgacgatccggttttgcgcgtgggtcgtgggcaaagcgctc
ggcctcggcaagactcctgcgccgccgacgctaccggctccctttcaatctgttgctcag
caggcgttcgatttcggcgatgaaccggttccggcgcagccttcgccaccgcagcagcgg
acggcctcaggttcgctactcggacggttcaagctcaaatatcgcttggcgctgagcgtc
ggggttgcggcgaccggcggcatcatcctgacgtttgccgcgatgatggtctattacacc
gtcgtttttcccgatccgcttgcgctgcgaaataacgatcgcgcgccgctcatccggatt
ctggcgcgcgatggaacgaccatcgcagaacgtggtgcagcgcacgaatatgtccggctt
gcggatctgccgaagctcattccggcggcggtcgtcgcgaccgaggaccggcgctttttc
gatcattacggcgtcgatccgtttggcatgttccgggcgatgttcgcgaacctccgcgcc
gggcgtttcgcgcaaggcggctcgacgctgacacagcagctcgcgaagaacctgtttctg
acgcaggagcgaacgctgacgcgcaaaattgccgagcttgggctggcgctgtggctcgaa
gtcaggctcacgaaggaggagatcctcgagctttatctcaaccaatgctacttcggcgcg
ggcgcctatggcgtcggctcggcaagcgagcggtatttcggcaaaccggcgcgcagcctc
aatctggcggaagccgcggtcatcgccggacttctcaaggcgccgtcgaaatattcgccg
gcgacgaaccctgatgctgcacgtgaacgcggccgcgtcgtcgtttccctgatgcgcgac
gcaggtttcatttcgcccgagcaagaaaagctcgtgctggcgcagccggttgtctttgct
gatccgaaaacgaccgccgttgcgcccgacaccggatatgtcgtcgattatattctggat
cagatgccgccgatttcgcagaccgcgagcggcgaggtcatcgtgcagacgacgctcgac
cgggacttgcagcgcagcgcgcaaaagatcgtcaaggatactctagcgcggaagggcgcg
gcgttcggggcaagtcaggcggcgcttgtcgtgctcgacaaggagggcggcattcgcgcg
ctcgtcggcggacgcgactacgcggaaagccagttcgaccgtgcggtgaaggcgaagcgc
caaccgggttctgcgtttaagccgttcgtctatctcgcggcgctcgatcgcggcatgacg
ccggatagcgtgatgttcgacgcgccggtgacgatcggcgactggtcgccgaagaacgac
aacaacaagtatgccggagaaatcacgcttcggcaggcgctggcgcagtcggtcaacacg
gttgccgtgcgtctcaatcaggatgtcggtgagggacggacgatcgcggtggcgcgacgg
ctcggcatcaggtccgatctgcacgaaggtccgtcgctggcgctcgggacgtcggaagtc
tcgctgctcgagatgtcgggcgcctatgccgtattctcgaacggcggcgaagcggtcgag
ccgcatatcatttcgcaggttcgcatcggaaatggatcgccggtctatgtcagtccgccg
ccgcgcaccgatcgcgtcgcgagcctcgatgagatcggcgcgctgaacgatatgctgaac
gcagttgtcgtcagcggcaccgggcgacgcgcggcgctgccggatcgccctgccgcgggt
aagacaggcacgacgcaggatttccgcgatgcctggttcatcggctacaccagccagctg
acggcgggcgtttgggtcggcaacgacaacggcaagccgatgatccgcacgacgggcggc
agcttgccggcggaaatctggaaccagatcatgcgcgttgcgcatcaaggcctgccgtcc
gcgccgctgcccggcacggtcgtcagcagacccgagcccgaagacgcgatcttgccggtg
gatgaggccgcgcacgtttcaaaagcgccgagcgcgccgcgtgtcgttcaatatcatgaa
gctctgccgtcggcggcgcgcgatgctgctcatcaaaggacaacgccgccaagggtggcg
gagaaggcagcggacattcagccgccgtcgcagtcgcatccgacgagcaatatcgacgac
gatttcatcgcgcgtgcgcttgccgatgaactggagcaacagcgggatgcgatgccggaa
caggagcctgtcgaggcgcgtccgggcgttgcggcattcgcaatcggcgctcgctag
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