Hyphomicrobium denitrificans ATCC 51888: Hden_0037
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Entry
Hden_0037 CDS
T01265
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
hdn
Hyphomicrobium denitrificans ATCC 51888
Pathway
hdn00300
Lysine biosynthesis
hdn00470
D-Amino acid metabolism
hdn01100
Metabolic pathways
hdn01110
Biosynthesis of secondary metabolites
hdn01120
Microbial metabolism in diverse environments
hdn01230
Biosynthesis of amino acids
Module
hdn_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
hdn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Hden_0037
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Hden_0037
Enzymes [BR:
hdn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Hden_0037
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ADJ21864
UniProt:
D8JPH3
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All DBs
Position
38577..39848
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AA seq
423 aa
AA seq
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MHHFHYKNGILHAEDVSLARIADEVGTPFYVYSTATLERHYKVLAEAFRDQKALICFAVK
ANSNQAVLATMARLGAGMDVVSEGELRRARAAGVPASKIIFAGVGKTRGEMAYALEEGIL
GFNVESEPELLALSEVATALGKTASIAIRVNPDVDAKTHAKISTGKAENKFGVPFEDARE
LYARAATLPGLKISGIHMHIGSQITDLAPFRDAFALLHDLARDLIADGIRLEHLDIGGGL
GVPYRGANDIPPTPDEYAAVVKAALGDLGLKIVLEPGRMIVGNAGLLVTRVTYVKEGEDK
TFTIVDAAMNDLIRPTLYEAYHEIWPVAEQRNDMAPVQQDIVGPVCETGDFLAEDRALPP
SEPGDLLAVMTAGAYGAVMSSTYNTRLLVPEVLVSGDRYAVVRPRPSYDDLIGADKLPPW
IAG
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcaccacttccactacaagaacggcattctgcatgccgaggacgtcagcctcgcgcgc
atcgcggacgaggtcgggacgccgttctatgtctattcgacggcgacgctcgaacgtcat
tacaaagtgctggctgaggcgttccgcgatcagaaggcgctgatctgcttcgcggtcaaa
gccaattccaatcaggcggtgctggcgacgatggcgcggctcggcgctggcatggacgtc
gtatccgagggcgagctgcggcgcgcgcgggcggctggcgttccggcctcgaagatcatt
tttgcaggcgtcggcaaaacgcgtggcgagatggcgtatgcgctggaggagggcattctc
ggcttcaatgtcgagagcgagccggagcttctggcgctgagcgaagttgcgacggcgctc
ggcaagacggcgtcgatcgcgatccgcgtcaatccggatgtcgacgcgaagacgcatgca
aagatttcaaccggcaaggccgaaaataagttcggcgtgccgttcgaggatgcgcgcgag
ctttatgcgcgcgcggcgacgctgccgggcctcaagatttccggcattcacatgcatatc
ggcagccagatcaccgatcttgcgccgttccgtgatgcgttcgcgctgctgcacgatctg
gcgcgcgatttgatcgcagatggtattcgccttgagcatctcgatatcggcggcgggctc
ggcgtgccgtatcgcggcgccaacgacattccgccgacgccggatgagtacgcagctgtc
gttaaagccgcgctgggcgatctcggtttgaagatcgtgctggagccgggccgcatgatc
gtcggcaacgccggtctgctcgtgacgcgcgtcacctacgtgaaggaaggcgaggacaag
acgttcaccatcgtcgatgcggcgatgaacgatctcattcgtccgacgctgtatgaggcc
tatcacgagatctggccggtcgcggagcagcgcaacgatatggctccggtgcagcaggat
atcgtcgggccggtatgtgagacgggcgatttcctcgctgaggatcgggcgttgccgccg
tcggagccgggcgatcttctggcggtgatgacggcgggtgcttacggcgcggtgatgtcg
tcgacgtacaacacgcgcttgctggtgccggaagttctggtcagcggcgatcgttatgcc
gtcgtccggccgcgcccgagctacgacgatctcatcggcgcggacaagctgccgccgtgg
atcgcgggttga
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