Hyphomicrobium denitrificans ATCC 51888: Hden_0078
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Entry
Hden_0078 CDS
T01265
Name
(GenBank) ABC transporter periplasmic substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
hdn
Hyphomicrobium denitrificans ATCC 51888
Pathway
hdn02010
ABC transporters
hdn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hdn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Hden_0078
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Hden_0078
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hdn02000
]
Hden_0078
Transporters [BR:
hdn02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Hden_0078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
Motif
Other DBs
NCBI-ProteinID:
ADJ21905
UniProt:
D8JPL4
LinkDB
All DBs
Position
91151..92437
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AA seq
428 aa
AA seq
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MAKSHFPLISALSVAMPRRKFVTKKNVNVGFLAPLSGPLKSWAEPGFNGCLIWQERINAS
GGLLIGDHRYLINVIPYDTQFQPDRAFEGARKLVIEDEVKFLIMVGGDDFSRPLRDFLNQ
RRILVSTALPSDLTPDSRTLIAPSEVHPIYNVTGVDWLKRTHPNIKTVAMCTQNDAHGIP
SIATYRAAFEAADIDVVAELLFPIETSEFKPLVEELLAKKPDLLCWDTAYEPFVHALTIE
AFRQGYRGPILSCTCDNYVELIAKTSAEFMEGFVFQFPDFDDPRLNDQQISFENPNGFYE
EFCARFPGTWSAVSWQYVSVLDIWKSAVERCRSFEPATVMAMMKVGGRSRNVFGDAIWWG
RELFGIDNALVGYWPVVRIQDGRARIVEFGSILDWWSKHKEVLIRHMRKMGLMWDQREEK
IAGSRFIL
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggccaagtcgcattttccgcttatttcggcgctgtcggtggcgatgccacgccgcaag
ttcgtgacgaagaagaatgtcaatgtcggatttctcgcgccgctgtccggccctttgaag
tcttgggcggagccagggttcaacggctgcctgatctggcaagagcggatcaatgcgagc
ggcggattgctgatcggcgatcatcgctacctgatcaacgtcatcccgtatgacacccag
ttccagcccgaccgggcgttcgaaggtgcacgcaagctcgtcatagaggatgaggtgaag
tttctcatcatggtgggcggcgacgacttctcgcggccgttgagggatttcctgaaccag
cggcgtattctcgtcagcacggcgttgccgagcgatctcacacccgactcgcgcacgctg
attgctccgagcgaagttcatccgatttacaacgtaaccggcgtcgactggctgaagcgg
acacatccgaacatcaagaccgtcgcgatgtgcacgcagaacgacgcgcacggcatcccg
tcgatcgccacgtatcgcgcggcgttcgaagccgccgatatcgatgttgtcgccgagctt
ctgtttccgatcgagacttccgaattcaagccgctcgtcgaggagctgcttgcgaagaag
ccggaccttctatgctgggacacggcctacgagccgttcgttcacgcgctgacgatcgaa
gctttccggcagggctaccgtgggccgatcctgtcgtgcacgtgcgataactatgtcgag
ctgatcgccaagacgtcggccgagttcatggaaggctttgtcttccagttccctgatttc
gacgatccgaggctgaacgatcagcagatcagtttcgaaaatccgaacggcttttacgaa
gagttctgcgcgcggtttccgggcacatggagcgcggtctcgtggcaatacgtgtcggtg
ctagatatctggaagtcggcggtcgaacgatgccgctcgttcgaacctgcgaccgtcatg
gcgatgatgaaggtcgggggccgcagccgcaacgttttcggggacgcgatctggtggggc
cgggagctgttcggcatcgacaacgcgctcgtcggatattggccggtggtgagaattcag
gacggacgggcgcggatcgtggaattcggctccattcttgattggtggtcaaagcataaa
gaggtgctgatccggcacatgcgcaagatggggctcatgtgggaccagcgcgaagagaaa
atcgcgggcagccgatttattctctaa
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