Hyphomicrobium denitrificans ATCC 51888: Hden_0331
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Entry
Hden_0331 CDS
T01265
Name
(GenBank) transcriptional regulator, AraC family
KO
K10778
AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:
2.1.1.63
]
Organism
hdn
Hyphomicrobium denitrificans ATCC 51888
Brite
KEGG Orthology (KO) [BR:
hdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hdn03000
]
Hden_0331
03400 DNA repair and recombination proteins [BR:
hdn03400
]
Hden_0331
Enzymes [BR:
hdn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.63 methylated-DNA---[protein]-cysteine S-methyltransferase
Hden_0331
Transcription factors [BR:
hdn03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Hden_0331
DNA repair and recombination proteins [BR:
hdn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
Hden_0331
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_binding_1
Ada_Zn_binding
HTH_18
HTH_AraC
Methyltransf_1N
Motif
Other DBs
NCBI-ProteinID:
ADJ22156
UniProt:
D8JR04
LinkDB
All DBs
Position
complement(340215..341321)
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AA seq
368 aa
AA seq
DB search
MMLIAPPMQKTRANPINNGPAQLTDAARWSAVKARDASFDGKFYYSVLTTGVYCRPSCSA
RLARRENVAFHASCAEAERAGFRPCKRCKPNESSLRDQYAAKILDACRRIEQSDEPPKLD
ELAQATGLSTYHFHRVFKAIVGLTPKAYAVAHRQKRVRENLARSSSVTDAIYASGFNSSG
RFYENSADFLGMTPTDFRVGGSNAEMRFAVGECSLGSILVAASSKGVTAIFLGDDPDTLV
RNLQDRFPKANLIGGDSSFEAIVAAAVSAVETPDQGFNLPLDVRGTAFQHRVWQALREVP
SGTTTTYTEIAERLGMPKAVRAVANACGANKIAVVIPCHRVVRNDGSLSGYRWGVERKRA
LLKRESKS
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgatcgctccgccaatgcaaaagaccagagcaaatcccatcaacaatggcccg
gcacaactcaccgacgctgcccgctggtcggccgtgaaagcgcgcgatgcgtccttcgac
ggtaagttctactattccgtgctcacaacgggcgtctattgccggccctcgtgttccgcc
cggcttgcaagacgagagaacgtggcgttccacgcatcatgcgccgaagctgagcgcgcg
gggtttcgtccctgcaagcgctgcaaaccgaacgagtcatctcttcgcgaccagtatgcc
gcgaaaattctcgacgcatgccgccggatcgaacaatccgatgaaccaccgaagctggat
gaactcgcgcaagcgaccggcctcagcacgtatcatttccatcgcgtattcaaagccatc
gtcggccttacgccaaaagcctacgcggtcgcccaccggcaaaaacgcgtgcgcgaaaac
cttgcaaggagtagttccgtgacggatgccatctatgcgtcaggcttcaactcgagcgga
cgcttctacgaaaattcagcggacttcctgggcatgacgccgacagacttccgcgttgga
ggaagcaacgcggaaatgcgctttgccgtcggcgaatgctctctgggttcaatcctcgtc
gccgccagcagcaagggcgtcacagcgatctttctcggcgatgatcccgatacgctcgtc
cgaaatctgcaggatcgctttcccaaagcaaacctgatcggcggcgacagcagcttcgag
gccatcgtcgcagcggccgtcagcgccgtcgaaaccccggatcaaggcttcaatctgccc
ctcgacgttcgcgggacggctttccagcatcgcgtctggcaggcgctgcgtgaagttccg
tctggaacgaccaccacctacaccgagatcgccgaacgcctcggcatgccgaaagctgtg
cgcgccgtggccaacgcctgcggcgcgaacaagatcgccgtggtgatcccgtgtcaccgc
gtcgtgcgcaacgatggctcgttgtccggctatcgatggggcgtagaacgcaaacgcgcg
ctgctcaagcgcgagtcaaagtcataa
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