Hyphomicrobium denitrificans ATCC 51888: Hden_0420
Help
Entry
Hden_0420 CDS
T01265
Name
(GenBank) lysyl-tRNA synthetase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
hdn
Hyphomicrobium denitrificans ATCC 51888
Pathway
hdn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hdn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Hden_0420
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hdn01007
]
Hden_0420
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hdn03016
]
Hden_0420
Enzymes [BR:
hdn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
Hden_0420
Amino acid related enzymes [BR:
hdn01007
]
Aminoacyl-tRNA synthetase
Class I (A)
Hden_0420
Transfer RNA biogenesis [BR:
hdn03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Hden_0420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1c
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
DUF903
Motif
Other DBs
NCBI-ProteinID:
ADJ22242
UniProt:
D8JRL3
LinkDB
All DBs
Position
complement(433943..435595)
Genome browser
AA seq
550 aa
AA seq
DB search
MTSLAFTAEQAAASEASKAWPFEEARRLIKRLERLPGGADKTVLFETGYGPSGLPHIGTF
GEVARTTMVRRAFELLTEGKRKTRLLCFSDDMDGMRKIPETVPDKKALEPYIQMPLTKVP
NPFGGEYPSFGDHNNAMLRRFLDTFGFDYEFASATEYYKAGRFDEVLLRAVERYDDIMAV
MLPTLGAERQASYSPFLPISPTSGHVLYVPMKEVDAKAGTITFTDEDGRDVTLPVTGGHV
KLQWKPDFGMRWAALGVDFEMFGKDHQTNAPIYDRICEILGGVAPQHYVYELFLDENGEK
ISKSKGNGITIDQWLTYASPESLALFMFQKPRSAKKLYFDVIPRAVDEYLQFLSAYPKQD
GKQQLDNPVWHIHAAQPPKPELPITFGLLLNLVSVSHAHSKDVLWGFLARYAPGATPENN
PILDRLAGYAIRYYEDFVKPTKKFRAPDEVEIAALQSLDSTLAALPAGSDGDTIQNALLD
VGRAIPRYQDPTKVSPSGGPGVKLDWFQAIYEILLGQERGPRLGTFVALYGIPETRALIA
KALSGSLATA
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgacctcccttgccttcaccgccgaacaagccgccgccagcgaagcctcgaaggcatgg
ccgttcgaagaagcccggcggctgatcaagcggctcgaacggcttccgggcggcgccgac
aagacggtcctgttcgaaaccggctacggaccctccggcctgccgcacatcggcaccttc
ggcgaggtcgcgcgcacgacgatggtccgccgcgccttcgagcttctgaccgaaggcaag
cgcaagacgcgtctgctttgcttttccgatgacatggacggcatgcgcaagattccggag
accgtaccggacaagaaggcgctggaaccctacatccagatgccgctgaccaaggtgccc
aatcccttcggcggcgagtatccgagcttcggcgaccacaacaacgcgatgctccgccgg
ttcctcgacaccttcggcttcgattacgaattcgcgagcgcgaccgaatactacaaggcc
ggccgcttcgacgaagtgctcctccgcgccgtcgaacgctacgacgacatcatggccgtg
atgctgccgacgctcggcgccgaacgccaggcgagctacagcccgtttcttccgatctcg
ccgacgagcggccacgtgctttacgtgccgatgaaggaagtcgacgccaaggccggcacg
atcaccttcaccgacgaggacggccgcgacgtgacgctccccgtcaccggcggccacgtg
aagctgcaatggaagcccgacttcggtatgcggtgggccgcgctcggcgttgacttcgag
atgttcggcaaggaccaccagacgaacgccccgatctacgaccggatttgcgaaatcctc
ggcggcgtcgcgcctcagcattacgtctacgaactcttcctcgacgagaacggcgagaag
atttcgaagtccaagggcaacggcatcaccatcgaccagtggctgacgtatgcttctccg
gaaagcctcgcgctcttcatgttccagaagccgagaagcgccaagaagctctacttcgac
gtcatcccgcgcgccgtcgacgaatacctgcagttcctttccgcctatccgaagcaggat
ggaaaacagcagctcgacaatccggtctggcacatccatgcggctcagccgccgaagccg
gagctaccgatcactttcggcctgctcttgaatctggtgtcggtctcgcacgcccacagc
aaggacgtgctctggggcttccttgcgcgctatgcgccgggcgcgacgcccgagaataat
ccgatcctcgatcgcctcgcaggctatgcgatccgctactacgaggacttcgtcaaaccg
acgaagaagttccgcgcgcctgacgaggtcgaaatcgcggcgctgcaaagcctcgattca
acgctcgcagcgctaccggcgggctcggacggcgacaccatccagaacgcgctgctcgat
gttggccgcgctatcccgcgataccaggacccgaccaaggtcagccccagcggcggcccg
ggcgtgaagctcgactggttccaggccatctacgaaattctgctcggacaggagcgcggg
ccgcgcctcgggacgttcgtcgcgctttatggaattcccgaaacgcgcgccctgatcgcc
aaagcactcagcggttccctcgcaactgcttga
DBGET
integrated database retrieval system
